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WormBase Tree Display for Gene: WBGene00229513

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Name Class

WBGene00229513SMapS_parentSequenceBm_v4_ChrX_scaffold_001
IdentityVersion7
NameCGC_nameBma-zmp-6.1From_analysisInferred_from_orthology
Sequence_nameBm9252
Molecular_nameBm9252
Bm9252.1
BM33373
Other_nameBm-zmp-1
TAG9252Curator_confirmedWBPerson4055
Bm1_31445ACurator_confirmedWBPerson4055
Bma-zmp-1
Bm1_31445Person_evidenceWBPerson5841
Public_nameBma-zmp-6.1
SpeciesBrugia malayi
HistoryVersion_change110 Dec 2012 14:43:26WBPerson4055EventCreated
205 Jul 2013 11:43:21WBPerson4055Name_changeCGC_nameBma-zmp-1
Other_nameBm-zmp-1
320 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameBma-zmp-5
Other_nameBma-zmp-1
408 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
508 May 2019 10:09:25WBPerson1983Name_changeCGC_nameBma-zmp-5
601 Oct 2019 10:47:49WBPerson1983Name_changeCGC_nameRemoved
728 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameBma-zmp-6.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classzmp
RNASeq_FPKMWBls:000009712.5007From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.L3/L4.WBbt:0007833.SRP068692.SRX1539819
0.079364From_analysisRNASeq.brugia.WBls:0000097.control_median
0.158728From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
11.387From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
1.73057From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
0From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
2.21272From_analysisRNASeq.brugia.WBls:0000097.control_mean
WBls:000007811.0738From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
12.6142From_analysisRNASeq.brugia.WBls:0000078.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
13.712From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
14.2475From_analysisRNASeq.brugia.WBls:0000078.control_mean
21.8465From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
22.0883From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
8.43372From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
9.96402From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
WBls:00000801.4956From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
1.5797From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
1.80625From_analysisRNASeq.brugia.WBls:0000080.control_median
2.0328From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
2.77176From_analysisRNASeq.brugia.WBls:0000080.control_mean
5.97894From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
WBls:0000081 (23)
WBls:000008210.6992From_analysisRNASeq.brugia.WBls:0000082.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
11.1748From_analysisRNASeq.brugia.WBls:0000082.control_mean
12.463From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
14.9661From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
8.63832From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
9.1073From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
WBls:0000083 (80)
WBls:00000922.51915From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
2.68642From_analysisRNASeq.brugia.WBls:0000092.control_mean
RNASeq.brugia.WBls:0000092.control_median
2.8537From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
WBls:00000944.9439From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
5.93029From_analysisRNASeq.brugia.WBls:0000094.control_mean
RNASeq.brugia.WBls:0000094.control_median
6.91669From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
WBls:000010110.4331From_analysisRNASeq.brugia.total_over_all_stages.control_mean
5.97894From_analysisRNASeq.brugia.total_over_all_stages.control_median
WBls:000066212.8514From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
13.9026From_analysisRNASeq.brugia.WBls:0000662.control_mean
RNASeq.brugia.WBls:0000662.control_median
14.9538From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
WBls:00006636.32119From_analysisRNASeq.brugia.WBls:0000663.control_mean
RNASeq.brugia.WBls:0000663.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
GO_annotation00247689
00247690
00247691
00247692
00247693
Ortholog (32)
ParalogWBGene00222755Brugia malayiFrom_analysisWormBase-Compara
WBGene00224918Brugia malayiFrom_analysisWormBase-Compara
WBGene00224951Brugia malayiFrom_analysisWormBase-Compara
WBGene00226152Brugia malayiFrom_analysisWormBase-Compara
WBGene00226519Brugia malayiFrom_analysisWormBase-Compara
WBGene00226974Brugia malayiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable metalloendopeptidase activity and zinc ion binding activity. Predicted to be involved in proteolysis. Predicted to be located in extracellular matrix. Is an ortholog of C. elegans zmp-1. In C. elegans, zmp-1 is involved in basement membrane disassembly.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm9252
Corresponding_transcriptBm9252.1
Other_sequenceJI239126.1
FC818239.1
GE639376.1
BMC10914_1
Experimental_infoExpression_clusterWBPaper00045439:BM_Cluster_P12
WBPaper00051007:upregulated_F120_vs_F30
WBPaper00051007:upregulated_M120_vs_F120
WBPaper00061765:L3_vs_Adult_Downregulated
WBPaper00061765:L4_vs_Adult_Downregulated
ReferenceWBPaper00045439
Remark[190208 pad] The CGC name Bma-zmp-5 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[191001 pad] The CGC name Bma-zmp-5 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene