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WormBase Tree Display for Gene: WBGene00232673

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Name Class

WBGene00232673SMapS_parentSequenceBm_v4_ChrX_scaffold_001
IdentityVersion9
NameCGC_nameBma-lin-2.2From_analysisInferred_from_orthology
Sequence_nameBm12412
Molecular_nameBm12412a
Bm12412a.1
BM35897
Bm12412b
Bm18505
Bm12412c
BM49275
Bm12412b.1
Bm12412c.1
Other_nameTAG12412Curator_confirmedWBPerson4055
TAG14672
TAG8867
Bm1_21360A
Bm1_33725Person_evidenceWBPerson5841
TAG3423
Bm1_33715
Bm1_33720
Public_nameBma-lin-2.2
SpeciesBrugia malayi
HistoryVersion_change110 Dec 2012 14:43:26WBPerson4055EventCreated
209 Oct 2015 09:28:23WBPerson4055EventAcquires_mergeWBGene00235007
309 Oct 2015 15:32:31WBPerson4055EventAcquires_mergeWBGene00229128
420 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameBma-lin-2
508 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
608 May 2019 10:09:23WBPerson1983Name_changeCGC_nameBma-lin-2
720 Aug 2020 14:14:31WBPerson4055EventAcquires_mergeWBGene00223684
828 May 2021 19:05:21WBPerson1983Name_changeCGC_nameRemoved
928 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameBma-lin-2.2
Acquires_mergeWBGene00223684
WBGene00229128
WBGene00235007
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlin
RNASeq_FPKMWBls:000009737.7022From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.L3/L4.WBbt:0007833.SRP068692.SRX1539819
12.0221From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
12.121From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
26.4214From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
27.842From_analysisRNASeq.brugia.WBls:0000097.control_mean
31.2242From_analysisRNASeq.brugia.WBls:0000097.control_median
36.027From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
38.0257From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
42.4349From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
WBls:000007814.2633From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
15.1545From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
24.413From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
27.2225From_analysisRNASeq.brugia.WBls:0000078.control_mean
28.4655From_analysisRNASeq.brugia.WBls:0000078.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
32.5365From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
35.5385From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
40.1864From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
WBls:000008035.0839From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
35.9552From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
60.1735From_analysisRNASeq.brugia.WBls:0000080.control_median
61.5009From_analysisRNASeq.brugia.WBls:0000080.control_mean
84.3919From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
90.5726From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
WBls:0000081 (24)
WBls:000008227.3579From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
29.165From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
47.9944From_analysisRNASeq.brugia.WBls:0000082.control_mean
58.2129From_analysisRNASeq.brugia.WBls:0000082.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
62.5131From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
62.7232From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
WBls:0000083 (82)
WBls:000009235.0823From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
35.632From_analysisRNASeq.brugia.WBls:0000092.control_mean
RNASeq.brugia.WBls:0000092.control_median
36.1818From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
WBls:000009464.3316From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
67.6036From_analysisRNASeq.brugia.WBls:0000094.control_mean
RNASeq.brugia.WBls:0000094.control_median
70.8756From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
WBls:000010132.6668From_analysisRNASeq.brugia.total_over_all_stages.control_median
38.331From_analysisRNASeq.brugia.total_over_all_stages.control_mean
WBls:000066290.4374From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
93.3675From_analysisRNASeq.brugia.WBls:0000662.control_mean
RNASeq.brugia.WBls:0000662.control_median
96.2976From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
WBls:000066363.5506From_analysisRNASeq.brugia.WBls:0000663.control_mean
RNASeq.brugia.WBls:0000663.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
GO_annotation00249060
00249061
00249062
00249063
Contained_in_operonBMOP2686
Ortholog (37)
ParalogWBGene00223133Brugia malayiFrom_analysisWormBase-Compara
WBGene00227103Brugia malayiFrom_analysisWormBase-Compara
WBGene00228462Brugia malayiFrom_analysisWormBase-Compara
WBGene00268338Brugia malayiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and protein tyrosine kinase activity. Is an ortholog of C. elegans lin-2. In C. elegans, lin-2 is involved in several processes, including egg-laying behavior; positive regulation of vulval development; and protein localization to membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm12412a
Bm12412b
Bm12412c
Corresponding_CDS_historyBm12412c:bm278
Bm12412d:bm278
Corresponding_transcriptBm12412a.1
Bm12412b.1
Bm12412c.1
Other_sequence (53)
Experimental_infoExpression_clusterWBPaper00051007:downregulated_M30_vs_L4
WBPaper00051007:upregulated_F30_vs_L4
WBPaper00061765:Adult_vs_Micro_Upregulated
WBPaper00061765:L3_vs_Adult_Upregulated
WBPaper00061765:L4_vs_Adult_Downregulated
ReferenceWBPaper00045439
Remark[190208 pad] The CGC name Bma-lin-2 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[2020-08-20T14:14:31.814Z WBPerson4055] Gene Merged: IsoSeq evidenceCurator_confirmedWBPerson4055
[210528 pad] The CGC name Bma-lin-2 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene