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WormBase Tree Display for Gene: WBGene00233839

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Name Class

WBGene00233839SMapS_parentSequenceBm_v4_Chr1_scaffold_001
IdentityVersion6
NameCGC_nameBma-lron-12From_analysisInferred_from_orthology
Sequence_nameBm13578
Molecular_nameBm13578
Bm13578.1
BM43625
Other_nameTAG13578Curator_confirmedWBPerson4055
Public_nameBma-lron-12
SpeciesBrugia malayi
HistoryVersion_change110 Dec 2012 14:43:26WBPerson4055EventCreated
224 Mar 2014 11:31:07WBPerson4055Name_changeCGC_nameBma-lron-12
308 Feb 2019 15:42:27WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:24WBPerson1983Name_changeCGC_nameBma-lron-12
528 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:28WBPerson1983Name_changeCGC_nameBma-lron-12
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlron
RNASeq_FPKMWBls:00000978.12644From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.L3/L4.WBbt:0007833.SRP068692.SRX1539819
0.052904From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
13.8793From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
0From_analysisRNASeq.brugia.WBls:0000097.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
2.32203From_analysisRNASeq.brugia.WBls:0000097.control_mean
WBls:00000780.939228From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
1.36559From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
1.65711From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
2.56729From_analysisRNASeq.brugia.WBls:0000078.control_mean
2.84829From_analysisRNASeq.brugia.WBls:0000078.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
3.27415From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
3.3709From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
4.51577From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
WBls:00000801.19413From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
1.40726From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
1.76984From_analysisRNASeq.brugia.WBls:0000080.control_median
1.90632From_analysisRNASeq.brugia.WBls:0000080.control_mean
2.13242From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
2.89148From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
WBls:0000081 (24)
WBls:00000820.488063From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
0.85129From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
1.02184From_analysisRNASeq.brugia.WBls:0000082.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
1.17136From_analysisRNASeq.brugia.WBls:0000082.control_mean
1.65342From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
1.84217From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
WBls:0000083 (52)
WBls:00000922.0629From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
2.26064From_analysisRNASeq.brugia.WBls:0000092.control_mean
RNASeq.brugia.WBls:0000092.control_median
2.45839From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
WBls:00000940.780754From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
0.942057From_analysisRNASeq.brugia.WBls:0000094.control_mean
RNASeq.brugia.WBls:0000094.control_median
1.10336From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
WBls:00001011.40726From_analysisRNASeq.brugia.total_over_all_stages.control_median
2.79741From_analysisRNASeq.brugia.total_over_all_stages.control_mean
WBls:00006620.961433From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
1.24969From_analysisRNASeq.brugia.WBls:0000662.control_mean
RNASeq.brugia.WBls:0000662.control_median
1.53795From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
WBls:00006630From_analysisRNASeq.brugia.WBls:0000663.control_mean
RNASeq.brugia.WBls:0000663.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
Ortholog (27)
ParalogWBGene00222171Brugia malayiFrom_analysisWormBase-Compara
WBGene00224221Brugia malayiFrom_analysisWormBase-Compara
WBGene00225037Brugia malayiFrom_analysisWormBase-Compara
WBGene00231241Brugia malayiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Leucine-rich repeat domain superfamily; BspA type Leucine rich repeat region; and BspA type Leucine rich repeat region (6 copies). Is an ortholog of C. elegans lron-12.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm13578
Corresponding_transcriptBm13578.1
Other_sequence (4)
Experimental_infoExpression_clusterWBPaper00061765:L3_vs_Adult_Downregulated
Remark[190208 pad] The CGC name Bma-lron-12 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Bma-lron-12 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene