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WormBase Tree Display for Gene: WBGene00269366

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Name Class

WBGene00269366SMapS_parentSequenceBm_v4_ChrX_scaffold_001
IdentityVersion4
NameCGC_nameBma-spl-3From_analysisInferred_from_orthology
Sequence_nameBm18217
Molecular_nameBm18217
Bm18217.1
BM03820
Other_nameBm1_31640ACurator_confirmedWBPerson4055
Bm1_31640Person_evidenceWBPerson5841
Public_nameBma-spl-3
SpeciesBrugia malayi
HistoryVersion_change102 Dec 2015 10:25:44WBPerson4055EventCreated
208 May 2019 10:09:24WBPerson1983Name_changeCGC_nameBma-spl-3
328 May 2021 19:05:21WBPerson1983Name_changeCGC_nameRemoved
428 Jul 2021 11:12:28WBPerson1983Name_changeCGC_nameBma-spl-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classspl
RNASeq_FPKMWBls:000009740.1713From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.L3/L4.WBbt:0007833.SRP068692.SRX1539819
25.5173From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
29.0726From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
33.2262From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
34.4339From_analysisRNASeq.brugia.WBls:0000097.control_mean
34.777From_analysisRNASeq.brugia.WBls:0000097.control_median
36.3278From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
40.3393From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
42.1205From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
WBls:000007836.51From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
36.8787From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
40.4016From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
42.2784From_analysisRNASeq.brugia.WBls:0000078.control_mean
42.6913From_analysisRNASeq.brugia.WBls:0000078.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
45.5256From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
46.2586From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
47.6829From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
WBls:000008037.98From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
38.1148From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
38.3241From_analysisRNASeq.brugia.WBls:0000080.control_median
38.4901From_analysisRNASeq.brugia.WBls:0000080.control_mean
38.5333From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
39.3322From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
WBls:0000081 (24)
WBls:000008231.9011From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
32.8214From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
34.5306From_analysisRNASeq.brugia.WBls:0000082.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
38.9028From_analysisRNASeq.brugia.WBls:0000082.control_mean
45.1402From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
50.1208From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
WBls:0000083 (80)
WBls:000009243.4791From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
44.3727From_analysisRNASeq.brugia.WBls:0000092.control_mean
RNASeq.brugia.WBls:0000092.control_median
45.2663From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
WBls:000009444.7248From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
45.3807From_analysisRNASeq.brugia.WBls:0000094.control_mean
RNASeq.brugia.WBls:0000094.control_median
46.0367From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
WBls:000010138.4325From_analysisRNASeq.brugia.total_over_all_stages.control_mean
39.3322From_analysisRNASeq.brugia.total_over_all_stages.control_median
WBls:000066241.8502From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
45.1From_analysisRNASeq.brugia.WBls:0000662.control_mean
RNASeq.brugia.WBls:0000662.control_median
48.3498From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
WBls:000066365.249From_analysisRNASeq.brugia.WBls:0000663.control_mean
RNASeq.brugia.WBls:0000663.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
GO_annotation (3)
Ortholog (36)
ParalogWBGene00222230Brugia malayiFrom_analysisWormBase-Compara
WBGene00224985Brugia malayiFrom_analysisWormBase-Compara
WBGene00226652Brugia malayiFrom_analysisWormBase-Compara
WBGene00231265Brugia malayiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable carbon-carbon lyase activity and pyridoxal phosphate binding activity. Predicted to be involved in carboxylic acid metabolic process. Is an ortholog of C. elegans spl-3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm18217
Corresponding_transcriptBm18217.1
Other_sequence (17)
Remark[210528 pad] The CGC name Bma-spl-3 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene