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WormBase Tree Display for Gene: WBGene00016329

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Name Class

WBGene00016329EvidencePaper_evidenceWBPaper00013472
SMapS_parentSequenceC32E12
IdentityVersion1
NameCGC_nameosr-1Person_evidenceWBPerson434
Sequence_nameC32E12.3
Molecular_nameC32E12.3
C32E12.3.1
CE30495
Other_nameCELE_C32E12.3Accession_evidenceNDBBX284601
Public_nameosr-1
DB_infoDatabaseAceViewgene1F768
WormQTLgeneWBGene00016329
WormFluxgeneWBGene00016329
NDBlocus_tagCELE_C32E12.3
NCBIgene172161
RefSeqproteinNM_059144.7
TrEMBLUniProtAccG5EEJ4
UniProt_GCRPUniProtAccG5EEJ4
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:57WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classosr
Allele (44)
StrainWBStrain00003470
WBStrain00031740
WBStrain00000175
WBStrain00004716
RNASeq_FPKM (74)
Ortholog (26)
Structured_descriptionAutomated_descriptionEnriched in ABalpapaap; ABarappaap; and tail hypodermis based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray and RNA-seq studies. Is affected by twenty-one chemicals including Ethanol; methylmercury hydroxide; and 1-methylnicotinamide based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC32E12.3
Corresponding_transcriptC32E12.3.1
Other_sequenceOden_isotig16363
FC809677.1
Dviv_isotig29674
SRC02762_1
SRC00417_1
Oden_isotig16364
SR02614
Associated_featureWBsf649148
WBsf219383
WBsf219384
WBsf219385
Experimental_infoRNAi_result (13)
Expr_patternChronogram395
Chronogram410
Expr2781
Expr2966
Expr5399
Expr1028844
Expr1036989
Expr1145702
Expr2014649
Expr2032882
Drives_constructWBCnstr00003931
WBCnstr00010948
WBCnstr00011051
WBCnstr00028154
Construct_productWBCnstr00028154
Microarray_results (18)
Expression_cluster (186)
Interaction (155)
Anatomy_functionWBbtf0321
WBbtf0322
WBbtf0323
WBbtf0324
WBbtf0325
WBbtf0326
WBbtf0327
WBbtf0328
WBbtf0329
Map_infoMapIPosition-0.275015Error0.003642
PositivePositive_cloneC32E12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point4850
4817
4687
Pseudo_map_position
ReferenceWBPaper00013472
WBPaper00017584
WBPaper00018856
WBPaper00026607
WBPaper00027061
WBPaper00028383
WBPaper00032037
WBPaper00032102
WBPaper00032390
WBPaper00033327
WBPaper00033448
WBPaper00038329
WBPaper00040109
WBPaper00041375
WBPaper00044584
WBPaper00054735
WBPaper00054939
WBPaper00059947
WBPaper00062822
WBPaper00064668
WBPaper00064849
WBPaper00065377
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene