WormBase Tree Display for Gene: WBGene00093388
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WBGene00093388 | SMap | S_parent | Sequence | PPA_ChrX | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 11 | |||||||
Name | CGC_name | Ppa-mec-18 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | PPA03834 | ||||||||
Molecular_name | PPA03834 | ||||||||
PPA03834.1 | |||||||||
PP64909 | |||||||||
Other_name | GENEPREDICTION_SNAP300000061421 | ||||||||
GENEPREDICTION_SNAP300000061422 | |||||||||
UMM-S2859-12.10 | Person_evidence | WBPerson606 | |||||||
Public_name | Ppa-mec-18 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
2 | 17 Nov 2017 15:19:42 | WBPerson4055 | Name_change | CGC_name | Ppa-twk-28 | ||||
3 | 24 Nov 2017 09:46:48 | WBPerson4055 | Event | Acquires_merge | WBGene00093389 | ||||
4 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Ppa-mec-18 | ||||
Other_name | Ppa-twk-28 | ||||||||
5 | 08 Feb 2019 15:42:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
6 | 08 May 2019 10:09:24 | WBPerson1983 | Name_change | CGC_name | Ppa-mec-18 | ||||
7 | 27 Nov 2019 12:48:15 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
8 | 04 Feb 2020 15:43:56 | WBPerson1983 | Name_change | CGC_name | Ppa-mec-18 | ||||
9 | 04 Jun 2020 14:38:21 | WBPerson1983 | Name_change | CGC_name | Ppa-twk-28 | ||||
Other_name | Ppa-mec-18 | ||||||||
10 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
11 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Ppa-mec-18 | ||||
Acquires_merge | WBGene00093389 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | mec | ||||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
GO_annotation | 00175020 | ||||||||
00175021 | |||||||||
00175022 | |||||||||
Ortholog (29) | |||||||||
Paralog (35) | |||||||||
Structured_description | Automated_description | Predicted to enable potassium channel activity. Predicted to be involved in potassium ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans mec-18. In C. elegans, mec-18 is involved in detection of mechanical stimulus involved in sensory perception of touch and mechanosensory behavior. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA03834 | |||||||
Corresponding_transcript | PPA03834.1 | ||||||||
Other_sequence (1241) | |||||||||
Experimental_info | Microarray_results | GPL14372_Probes_2037 | |||||||
GPL14372_Probes_2038 | |||||||||
GPL14372_Probes_2039 | |||||||||
GPL14372_Probes_2040 | |||||||||
GPL14372_Probes_2041 | |||||||||
GPL14372_Probes_2042 | |||||||||
GPL14372_Probes_2043 | |||||||||
GPL14372_Probes_2044 | |||||||||
GPL14372_Probes_2045 | |||||||||
GPL14372_Probes_39098 | |||||||||
Remark | [190208 pad] The CGC name Ppa-mec-18 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
[191127 pad] The CGC name Ppa-mec-18 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
[210528 pad] The CGC name Ppa-twk-28 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
Removed duplicate Other_name Ppa-mec-18 | Curator_confirmed | WBPerson1983 | |||||||
Method | Gene |