WormBase Tree Display for Gene: WBGene00154600

WBGene00154600 SMap: S_parent: Sequence: Cbre_Contig125
  Identity: Version: 4
    Name: CGC_name: Cbn-nrfl-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN15875
      Molecular_name: CBN15875
        CBN15875.1
        CN37269
      Other_name: Cbn-mpz-2 From_analysis: Inferred_from_orthology
      Public_name: Cbn-nrfl-1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:51 WBPerson4055 Event: Imported: from NGASP
        2 12 Aug 2009 10:41:13 WBPerson615 Event: Acquires_merge: WBGene00160839
        3 07 Feb 2012 16:36:56 WBPerson2970 Name_change: CGC_name: Cbn-mpz-2
        4 20 Jul 2012 14:22:06 WBPerson2970 Name_change: CGC_name: Cbn-nrfl-1
                Other_name: Cbn-mpz-2
      Acquires_merge: WBGene00160839
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nrfl
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        3.73293 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        7.46587 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        44.3017 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        45.0964 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        45.9144 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        51.0174 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        51.1364 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
      WBls:0000038 86.5798 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        86.6115 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        86.6431 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 16.0228 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
        16.4758 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
        17.1157 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
        17.1659 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
        18.5413 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
        19.5237 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
        22.1898 From_analysis: RNASeq.brenneri.WBls:0000041.control_median
        24.8559 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
        27.0794 From_analysis: RNASeq.brenneri.WBls:0000041.control_mean
        28.0564 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
        34.6407 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
        36.7869 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
        37.9296 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
        41.3231 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
        43.59 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
        81.242 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
      WBls:0000101 17.1157 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        23.2579 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    Ortholog (30)
    Paralog: WBGene00139348 Caenorhabditis brenneri From_analysis: GeneACeDB-Compara
      WBGene00142643 Caenorhabditis brenneri From_analysis: GeneACeDB-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: PDZ superfamily; PDZ domain; and PDZ domain 6. Is an ortholog of C. elegans nrfl-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN15875
    Corresponding_CDS_history: CBN15875:np206
    Corresponding_transcript: CBN15875.1
    Other_sequence (85)
  Experimental_info: Microarray_results: GPL14142_CBN15875_117-176_0.889_27_A
      GPL14142_CBN22114_268-327_0.963_1_A
  Method: Gene