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WormBase Tree Display for Gene: WBGene00238408

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Name Class

WBGene00238408SMapS_parentSequenceOVOC_OM1b_63
IdentityVersion2
NameCGC_nameOvo-adpr-1From_analysisInferred_from_orthology
Sequence_nameOVOC1599
Molecular_nameOVOC1599
OVOC1599.1
OVP05018
Public_nameOvo-adpr-1
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:34WBPerson4055Name_changeCGC_nameOvo-adpr-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classadpr
RNASeq_FPKMWBls:000010113.9715From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
14.496From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:000010410.6584From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
11.3129From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
12.3317From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
1.29337From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
13.6115From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
13.7559From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
14.3315From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
20.9256From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
21.1881From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
2.33506From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
26.5128From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
2.96802From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
3.65473From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
4.52872From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
52.0312From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
8.65558From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
WBls:000010716.3035From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010816.1945From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
19.149From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
20.3206From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
20.932From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
WBls:000066418.723From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
19.4109From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
20.0989From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Ortholog (30)
ParalogWBGene00243038Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: WD domain, G-beta repeat; WD40-repeat-containing domain superfamily; Tetratricopeptide-like helical domain superfamily; WD40/YVTN repeat-like-containing domain superfamily; and WD40 repeat. Is an ortholog of C. elegans adpr-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC1599
Corresponding_transcriptOVOC1599.1
Other_sequence (16)
MethodGene