WormBase Tree Display for Gene: WBGene00000007

WBGene00000007 Evidence: Author_evidence: Veljkovic E
      Verrey F
  SMap: S_parent: Sequence: T11F9
  Identity: Version: 1
    Name: CGC_name: aat-6
      Sequence_name: T11F9.4
      Molecular_name: T11F9.4a
        T11F9.4a.1
        CE31995
        T11F9.4b
        CE42501
        T11F9.4b.1
      Other_name: CELE_T11F9.4 Accession_evidence: NDB BX284605
      Public_name: aat-6
    DB_info: Database: AceView gene 5L944
        WormQTL gene WBGene00000007
        WormFlux gene WBGene00000007
        NDB locus_tag CELE_T11F9.4
        Panther gene CAEEL|WormBase=WBGene00000007|UniProtKB=Q22397
          family PTHR11785
        NCBI gene 188421
        RefSeq protein NM_073504.5
            NM_001129542.4
        SwissProt UniProtAcc Q22397
        UniProt_GCRP UniProtAcc Q22397
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:19 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: aat
    Allele (57)
    RNASeq_FPKM (74)
    GO_annotation (13)
    Ortholog (34)
    Paralog (12)
    Structured_description: Concise_description: aat-6 encodes a predicted amino acid transporter catalytic subunit; unlike catalytic subunits in other organisms, however, AAT-6 does not contain the highly conserved cysteine residue known to facilitate covalent interaction with a glycoprotein subunit, suggesting that AAT-6 does not require this residue for heterodimer formation or alternatively, does not require the glycoprotein subunit for function. Paper_evidence: WBPaper00006408
          Curator_confirmed: WBPerson1843
          Date_last_updated: 03 Mar 2006 00:00:00
      Automated_description: Enables PDZ domain binding activity. Predicted to be involved in amino acid transmembrane transport. Located in apical plasma membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T11F9.4a
      T11F9.4b
    Corresponding_CDS_history: T11F9.4:wp87
    Corresponding_transcript: T11F9.4a.1
      T11F9.4b.1
    Other_sequence (33)
    Associated_feature: WBsf1001359
      WBsf1001360
      WBsf1020454
      WBsf006135
      WBsf234536
      WBsf234537
      WBsf234538
  Experimental_info: RNAi_result: WBRNAi00053126 Inferred_automatically: RNAi_primary
      WBRNAi00018604 Inferred_automatically: RNAi_primary
      WBRNAi00035480 Inferred_automatically: RNAi_primary
      WBRNAi00018603 Inferred_automatically: RNAi_primary
      WBRNAi00113688 Inferred_automatically: RNAi_primary
      WBRNAi00053127 Inferred_automatically: RNAi_primary
      WBRNAi00089156 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr10567
      Expr1024840
      Expr1156733
      Expr2009069
      Expr2027305
    Drives_construct: WBCnstr00015609
      WBCnstr00037801
    Construct_product: WBCnstr00015609
      WBCnstr00037801
    Microarray_results (22)
    Expression_cluster (155)
    Interaction (28)
  Map_info: Map: V Position: 3.12819 Error: 0.004026
    Positive: Positive_clone: T11F9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00006408
    WBPaper00041455
    WBPaper00055920
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene