WormBase Tree Display for Gene: WBGene00000014
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WBGene00000014 | SMap | S_parent | Sequence | F54B8 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | abf | ||||||
Allele (18) | |||||||
Strain | WBStrain00033118 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00106028 | ||||||
00106029 | |||||||
00106030 | |||||||
00106031 | |||||||
00106032 | |||||||
Ortholog (11) | |||||||
Paralog | WBGene00000016 | Caenorhabditis elegans | From_analysis | TreeFam | |||
WormBase-Compara | |||||||
WBGene00000017 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WBGene00000015 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WormBase-Compara | |||||||
WBGene00012634 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Concise_description | abf-3 encodes a homolog of the antibacterial factor ASABF from Ascaris suum; ABF-3 may play a role in innate immunity, though at present the only evidence for its having an antimicrobial humoral function is its sequence similarity. | Paper_evidence | WBPaper00005130 | |||
WBPaper00013575 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Involved in defense response to Gram-negative bacterium and innate immune response. Expressed in intestine and rectal gland cell. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F54B8.5 | |||||
Corresponding_transcript | F54B8.5.1 | ||||||
Experimental_info | RNAi_result | WBRNAi00075951 | Inferred_automatically | RNAi_primary | |||
WBRNAi00015580 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00048238 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr4721 | ||||||
Expr1018337 | |||||||
Expr1152044 | |||||||
Drives_construct | WBCnstr00012198 | ||||||
WBCnstr00015899 | |||||||
WBCnstr00037797 | |||||||
Construct_product | WBCnstr00012198 | ||||||
WBCnstr00037797 | |||||||
Microarray_results (16) | |||||||
Expression_cluster (27) | |||||||
Interaction | WBInteraction000200889 | ||||||
WBInteraction000237996 | |||||||
WBInteraction000409750 | |||||||
WBInteraction000425220 | |||||||
Map_info | Map | V | Position | 8.96195 | Error | 0.000746 | |
Positive | Positive_clone | F54B8 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00003925 | ||||||
WBPaper00023115 | |||||||
WBPaper00024209 | |||||||
WBPaper00025180 | |||||||
WBPaper00029438 | |||||||
WBPaper00055320 | |||||||
WBPaper00061774 | |||||||
WBPaper00064781 | |||||||
WBPaper00065681 | |||||||
WBPaper00065988 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |