WormBase Tree Display for Gene: WBGene00000028

WBGene00000028 SMap: S_parent: Sequence: Y105C5A
  Identity: Version: 1
    Name: CGC_name: abu-5 Person_evidence: WBPerson530
      Sequence_name: Y105C5A.4
      Molecular_name: Y105C5A.4
        Y105C5A.4.1
        CE23186
      Other_name: pqn-77 CGC_data_submission
        CELE_Y105C5A.4 Accession_evidence: NDB BX284604
      Public_name: abu-5
    DB_info: Database: AceView gene 4Q355
        WormQTL gene WBGene00000028
        WormFlux gene WBGene00000028
        NDB locus_tag CELE_Y105C5A.4
        Panther gene CAEEL|WormBase=WBGene00000028|UniProtKB=Q9NF70
          family PTHR31895
        NCBI gene 190870
        RefSeq protein NM_070472.1
        TREEFAM TREEFAM_ID TF315535
        TrEMBL UniProtAcc Q9NF70
        UniProt_GCRP UniProtAcc Q9NF70
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:19 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: abu
    Allele (16)
    RNASeq_FPKM (74)
    GO_annotation: 00096663
    Ortholog (27)
    Paralog (30)
    Structured_description: Concise_description: abu-5 encodes a transmembrane protein with a predicted signal sequence, a glutamine/asparagine-rich domain and multiple cysteine-rich repeats (DUF139); abu-5 expression is induced by blockage of the unfolded-protein response in the endoplasmic reticulum (ER), and ABU-5 may function within the ER to protect the organism from damage by improperly folded nascent protein. Paper_evidence: WBPaper00005068
            WBPaper00005432
            WBPaper00012788
            WBPaper00012830
            WBPaper00012882
            WBPaper00012897
            WBPaper00013003
            WBPaper00013108
          Curator_confirmed: WBPerson1843
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Involved in endoplasmic reticulum unfolded protein response. Expressed in pharyngeal muscle cell. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y105C5A.4
    Corresponding_transcript: Y105C5A.4.1
    Associated_feature: WBsf998746
      WBsf1018775
  Experimental_info: RNAi_result: WBRNAi00093067 Inferred_automatically: RNAi_primary
      WBRNAi00055184 Inferred_automatically: RNAi_primary
      WBRNAi00093068 Inferred_automatically: RNAi_primary
      WBRNAi00093062 Inferred_automatically: RNAi_primary
      WBRNAi00093073 Inferred_automatically: RNAi_primary
      WBRNAi00019834 Inferred_automatically: RNAi_primary
      WBRNAi00019833 Inferred_automatically: RNAi_primary
      WBRNAi00055183 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr12491
      Expr1158717
    Drives_construct: WBCnstr00021464
      WBCnstr00037786
    Construct_product: WBCnstr00037786
    Microarray_results (13)
    Expression_cluster (59)
    Interaction: WBInteraction000005811
      WBInteraction000502258
      WBInteraction000503314
      WBInteraction000520466
  Map_info: Map: IV Position: 14.2295
    Positive: Positive_clone: Y105C5A Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00026929
    WBPaper00045960
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene