WormBase Tree Display for Gene: WBGene00000048
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WBGene00000048 | SMap | S_parent | Sequence | C40C9 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | acr-9 | Person_evidence | WBPerson1430 | |||||
Sequence_name | C40C9.2 | ||||||||
Molecular_name | C40C9.2 | ||||||||
C40C9.2.1 | |||||||||
CE37330 | |||||||||
Other_name | CELE_C40C9.2 | Accession_evidence | NDB | BX284606 | |||||
Public_name | acr-9 | ||||||||
DB_info | Database | AceView | gene | XO262 | |||||
WormQTL | gene | WBGene00000048 | |||||||
WormFlux | gene | WBGene00000048 | |||||||
NDB | locus_tag | CELE_C40C9.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00000048|UniProtKB=Q18556 | |||||||
family | PTHR18945 | ||||||||
NCBI | gene | 191597 | |||||||
RefSeq | protein | NM_077884.5 | |||||||
TrEMBL | UniProtAcc | Q18556 | |||||||
UniProt_GCRP | UniProtAcc | Q18556 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:19 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | acr | ||||||||
Allele (86) | |||||||||
Strain | WBStrain00035950 | ||||||||
WBStrain00035014 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (28) | |||||||||
Ortholog (33) | |||||||||
Paralog (100) | |||||||||
Structured_description (2) | |||||||||
Disease_info | Potential_model | DOID:10652 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1960) | ||||
DOID:3908 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1960) | ||||||
DOID:3748 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1960) | ||||||
DOID:8778 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1960) | ||||||
DOID:3083 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1960) | ||||||
DOID:12217 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1960) | ||||||
DOID:8577 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1960) | ||||||
DOID:1324 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1960) | ||||||
DOID:7474 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1960) | ||||||
DOID:5419 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1960) | ||||||
Molecular_info | Corresponding_CDS | C40C9.2 | |||||||
Corresponding_CDS_history | C40C9.2:wp121 | ||||||||
C40C9.2:wp131 | |||||||||
Corresponding_transcript | C40C9.2.1 | ||||||||
Other_sequence (20) | |||||||||
Associated_feature | WBsf654536 | ||||||||
WBsf654537 | |||||||||
WBsf1007676 | |||||||||
WBsf238157 | |||||||||
Experimental_info | RNAi_result | WBRNAi00011810 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00042249 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00029703 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00066391 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00102758 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1010409 | ||||||||
Expr1146240 | |||||||||
Expr1200297 | |||||||||
Expr2009198 | |||||||||
Expr2027436 | |||||||||
Drives_construct | WBCnstr00037769 | ||||||||
Construct_product | WBCnstr00037769 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (112) | |||||||||
Interaction | WBInteraction000149612 | ||||||||
WBInteraction000239096 | |||||||||
WBInteraction000304002 | |||||||||
WBInteraction000518503 | |||||||||
Map_info | Map | X | Position | 14.0194 | Error | 0.038412 | |||
Positive | Positive_clone | C40C9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 5297 | |||||||
Pseudo_map_position | |||||||||
Reference (15) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |