WormBase Tree Display for Gene: WBGene00000082
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| WBGene00000082 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | adt-1 | Person_evidence | WBPerson269 | |||||
| Sequence_name | C02B4.1 | ||||||||
| Molecular_name | C02B4.1a | ||||||||
| C02B4.1a.1 | |||||||||
| CE31872 | |||||||||
| C02B4.1b | |||||||||
| CE53639 | |||||||||
| C02B4.1b.1 | |||||||||
| Other_name | CELE_C02B4.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | adt-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | adt | ||||||||
| Allele (194) | |||||||||
| Strain | WBStrain00034922 | ||||||||
| WBStrain00036654 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00001650 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00000083 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003242 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00009958 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00021171 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00020567 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016468 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00086562 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00003248 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | The adt-1 gene encodes a metalloproteinase with disintegrin-like and metalloproteinase with thrombospondin type I motifs (ADAMTS) that is required for male tail morphogenesis. | Paper_evidence | WBPaper00005189 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable metalloendopeptidase activity. Predicted to be involved in extracellular matrix organization. Predicted to be located in extracellular matrix. Expressed in several structures, including amphid neurons; body wall musculature; pharyngeal muscle cell; ventral nerve cord; and vulva. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C02B4.1a | |||||||
| C02B4.1b | |||||||||
| Corresponding_CDS_history | C02B4.1:wp87 | ||||||||
| Corresponding_transcript | C02B4.1a.1 | ||||||||
| C02B4.1b.1 | |||||||||
| Other_sequence | AB066246 | ||||||||
| FC552333.1 | |||||||||
| ACC36025_1 | |||||||||
| Dviv_contig25586 | |||||||||
| Dviv_isotig34032 | |||||||||
| JI164869.1 | |||||||||
| Associated_feature (33) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00009969 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00039392 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00110299 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00088971 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr180 | ||||||||
| Expr1852 | |||||||||
| Expr1011925 | |||||||||
| Expr1030038 | |||||||||
| Expr1143508 | |||||||||
| Expr2009244 | |||||||||
| Expr2027481 | |||||||||
| Drives_construct | WBCnstr00010485 | ||||||||
| WBCnstr00037746 | |||||||||
| Construct_product | WBCnstr00010485 | ||||||||
| WBCnstr00037746 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (169) | |||||||||
| Interaction | WBInteraction000202637 | ||||||||
| WBInteraction000315149 | |||||||||
| WBInteraction000319361 | |||||||||
| WBInteraction000568171 | |||||||||
| Map_info | Map | X | Position | 7.70958 | Error | 0.052553 | |||
| Positive | Positive_clone | C02B4 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 5425 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005189 | ||||||||
| WBPaper00018171 | |||||||||
| WBPaper00037071 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Sequence connection from [Hosono R] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
