WormBase Tree Display for Gene: WBGene00000113
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| WBGene00000113 | SMap | S_parent | Sequence | F45H10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | alh-7 | Person_evidence | WBPerson651 | |||||
| Sequence_name | F45H10.1 | ||||||||
| Molecular_name | F45H10.1a | ||||||||
| F45H10.1a.1 | |||||||||
| CE46454 | |||||||||
| F45H10.1b | |||||||||
| CE46129 | |||||||||
| F45H10.1b.1 | |||||||||
| Other_name | CELE_F45H10.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | alh-7 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | alh | ||||||||
| Allele (193) | |||||||||
| Strain | WBStrain00003120 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00009086 | ||||||||
| 00009087 | |||||||||
| 00009088 | |||||||||
| 00009089 | |||||||||
| 00106820 | |||||||||
| 00106821 | |||||||||
| Contained_in_operon | CEOP2612 | ||||||||
| Ortholog (39) | |||||||||
| Paralog (11) | |||||||||
| Structured_description | Concise_description | alh-7 encodes an ortholog of the human gene DJ73M23.2 (NAD+-DEPENDENT SUCCINIC SEMIALDEHYDE DEHYDROGENASE; ALDH5A1), which when mutated leads to SSADH deficiency (OMIM:271980). | Paper_evidence | WBPaper00004637 | |||||
| Curator_confirmed | WBPerson1823 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable succinate-semialdehyde dehydrogenase (NAD+) activity. Predicted to be involved in gamma-aminobutyric acid catabolic process. Predicted to be located in mitochondrion. Human ortholog(s) of this gene implicated in succinic semialdehyde dehydrogenase deficiency. Is an ortholog of human ALDH5A1 (aldehyde dehydrogenase 5 family member A1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0060175 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:408) | ||||
| Molecular_info | Corresponding_CDS | F45H10.1a | |||||||
| F45H10.1b | |||||||||
| Corresponding_CDS_history | F45H10.1:wp227 | ||||||||
| Corresponding_transcript | F45H10.1a.1 | ||||||||
| F45H10.1b.1 | |||||||||
| Other_sequence (63) | |||||||||
| Associated_feature | WBsf666318 | ||||||||
| WBsf666319 | |||||||||
| WBsf666320 | |||||||||
| WBsf1013647 | |||||||||
| WBsf224173 | |||||||||
| WBsf224174 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00015044 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00047446 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00026864 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020483 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1917 | ||||||||
| Expr6082 | |||||||||
| Expr1013518 | |||||||||
| Expr1030060 | |||||||||
| Expr1151284 | |||||||||
| Expr2009309 | |||||||||
| Expr2027545 | |||||||||
| Drives_construct | WBCnstr00003603 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (91) | |||||||||
| Interaction (90) | |||||||||
| Map_info | Map | II | Position | 17.5237 | Error | 0.071657 | |||
| Positive | Positive_clone | F45H10 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00041771 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056617 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
