WormBase Tree Display for Gene: WBGene00000502

WBGene00000502 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: Y110A7A
  Identity: Version: 1
    Name: CGC_name: chp-1
      Sequence_name: Y110A7A.13
      Molecular_name: Y110A7A.13
        Y110A7A.13.1
        CE23244
      Other_name: chp Accession_evidence: EMBL AF192264
        CELE_Y110A7A.13 Accession_evidence: NDB BX284601
      Public_name: chp-1
    DB_info: Database: AceView gene 1F672
        WormQTL gene WBGene00000502
        WormFlux gene WBGene00000502
        NDB locus_tag CELE_Y110A7A.13
        Panther gene CAEEL|WormBase=WBGene00000502|UniProtKB=G5EEI8
          family PTHR12621
        NCBI gene 172138
        RefSeq protein NM_059118.7
        SwissProt UniProtAcc G5EEI8
        TREEFAM TREEFAM_ID TF105394
        UniProt_GCRP UniProtAcc G5EEI8
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: chp
    Allele (20)
    Strain: WBStrain00031920
    RNASeq_FPKM (74)
    GO_annotation: 00016337
      00016338
      00016339
    Contained_in_operon: CEOP1216
    Ortholog (39)
    Structured_description: Concise_description: chp-1 encodes a protein containing two CHORD domains that is required for embryonic polarity, germline development, and vulval development. Paper_evidence: WBPaper00003759
            WBPaper00011525
          Curator_confirmed: WBPerson48
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable zinc ion binding activity. Predicted to be involved in centrosome duplication. Is an ortholog of human CHORDC1 (cysteine and histidine rich domain containing 1) and ITGB1BP2 (integrin subunit beta 1 binding protein 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y110A7A.13
    Corresponding_transcript: Y110A7A.13.1
    Other_sequence (54)
    Associated_feature: WBsf649138
      WBsf219366
      WBsf219367
      WBsf219368
  Experimental_info: RNAi_result (14)
    Expr_pattern: Expr1012692
      Expr1030297
      Expr1158854
      Expr2009996
      Expr2028237
    Drives_construct: WBCnstr00037493
    Construct_product: WBCnstr00037493
    Microarray_results (17)
    Expression_cluster (114)
    Interaction: WBInteraction000028455
      WBInteraction000030115
      WBInteraction000037661
      WBInteraction000037662
      WBInteraction000049767
      WBInteraction000514820
      WBInteraction000575164
      WBInteraction000583874
      WBInteraction000584183
  Map_info: Map: I Position: -0.411424 Error: 0.001014
    Positive: Positive_clone: Y110A7A Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4985
    Pseudo_map_position
  Reference (11)
  Remark: Sequence connection from [Shirasu K, Tan M-W]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene