WormBase Tree Display for Gene: WBGene00000552
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| WBGene00000552 | SMap | S_parent | Sequence | T21H3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | cmd-1 | Person_evidence | WBPerson689 | |||||
| Sequence_name | T21H3.3 | ||||||||
| Molecular_name | T21H3.3a | ||||||||
| T21H3.3a.1 | |||||||||
| CE13902 | |||||||||
| T21H3.3b | |||||||||
| CE50997 | |||||||||
| T21H3.3b.1 | |||||||||
| Other_name | CELE_T21H3.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | cmd-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cmd | ||||||||
| Allele (36) | |||||||||
| Strain | WBStrain00047490 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (19) | |||||||||
| Ortholog (47) | |||||||||
| Paralog (18) | |||||||||
| Structured_description | Concise_description | cmd-1 encodes a putative homolog of calmodulin 1 that affects growth rate and fertility. | Paper_evidence | WBPaper00005654 | |||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable calcium ion binding activity and enzyme regulator activity. Involved in several processes, including apoptotic cell clearance; establishment of meiotic spindle orientation; and positive chemotaxis. Located in cell periphery; microtubule cytoskeleton; and nuclear membrane. Human ortholog(s) of this gene implicated in Alzheimer's disease; catecholaminergic polymorphic ventricular tachycardia 4; intrinsic cardiomyopathy (multiple); and major depressive disorder. Is an ortholog of human CALM1 (calmodulin 1); CALM2 (calmodulin 2); and CALM3 (calmodulin 3). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0060678 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1442) | ||||
| DOID:10652 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1442) | ||||||
| DOID:0110656 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1445) | ||||||
| DOID:1470 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1445) | ||||||
| DOID:0110655 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1442) | ||||||
| DOID:0080326 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1449) | ||||||
| DOID:0060674 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1449) | ||||||
| Molecular_info | Corresponding_CDS | T21H3.3a | |||||||
| T21H3.3b | |||||||||
| Corresponding_transcript | T21H3.3a.1 | ||||||||
| T21H3.3b.1 | |||||||||
| Other_sequence (175) | |||||||||
| Associated_feature (18) | |||||||||
| Experimental_info | RNAi_result (38) | ||||||||
| Expr_pattern | Expr4835 | ||||||||
| Expr1015383 | |||||||||
| Expr1030333 | |||||||||
| Expr1157313 | |||||||||
| Expr2010257 | |||||||||
| Expr2028499 | |||||||||
| Drives_construct | WBCnstr00037458 | ||||||||
| Construct_product | WBCnstr00004964 | ||||||||
| WBCnstr00015565 | |||||||||
| WBCnstr00016078 | |||||||||
| WBCnstr00037458 | |||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (163) | |||||||||
| Interaction (337) | |||||||||
| Map_info | Map | V | Position | -19.8506 | Error | 0.000303 | |||
| Positive | Positive_clone | T21H3 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (20) | |||||||||
| Remark | Sequence connection from [Batchelder E, White JG, Walker J], 02/06/11 krb. | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
