WormBase Tree Display for Gene: WBGene00000638
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WBGene00000638 | Evidence | Person_evidence | WBPerson345 | ||||||
---|---|---|---|---|---|---|---|---|---|
WBPerson651 | |||||||||
SMap | S_parent | Sequence | C15A11 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | col-62 | Person_evidence | WBPerson345 | |||||
Sequence_name | C15A11.6 | ||||||||
Molecular_name | C15A11.6 | ||||||||
C15A11.6.1 | |||||||||
CE08174 | |||||||||
Other_name | CELE_C15A11.6 | Accession_evidence | NDB | BX284601 | |||||
Public_name | col-62 | ||||||||
DB_info | Database | AceView | gene | 1H980 | |||||
WormFlux | gene | WBGene00000638 | |||||||
NDB | locus_tag | CELE_C15A11.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00000638|UniProtKB=Q93207 | |||||||
family | PTHR24637 | ||||||||
NCBI | gene | 172495 | |||||||
RefSeq | protein | NM_059690.2 | |||||||
TREEFAM | TREEFAM_ID | TF316783 | |||||||
TrEMBL | UniProtAcc | Q93207 | |||||||
UniProt_GCRP | UniProtAcc | Q93207 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | col | ||||||||
Allele | WBVar01894782 | ||||||||
WBVar02127822 | |||||||||
WBVar02127823 | |||||||||
WBVar01499786 | |||||||||
WBVar01499054 | |||||||||
WBVar00649470 | |||||||||
WBVar00649471 | |||||||||
WBVar00649472 | |||||||||
WBVar00649473 | |||||||||
WBVar01498959 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00085527 | ||||||||
00085528 | |||||||||
00085529 | |||||||||
00107639 | |||||||||
Ortholog (38) | |||||||||
Paralog (170) | |||||||||
Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C15A11.6 | |||||||
Corresponding_transcript | C15A11.6.1 | ||||||||
Other_sequence (71) | |||||||||
Associated_feature | WBsf219769 | ||||||||
Experimental_info | RNAi_result | WBRNAi00007367 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00040576 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00040577 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00002953 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00115373 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00002952 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1144631 | ||||||||
Expr2010412 | |||||||||
Drives_construct | WBCnstr00037407 | ||||||||
WBCnstr00041984 | |||||||||
WBCnstr00042086 | |||||||||
Construct_product | WBCnstr00037407 | ||||||||
Microarray_results | SMD_C15A11.6 | ||||||||
GPL3518_CE08174 | |||||||||
Expression_cluster (188) | |||||||||
Interaction (98) | |||||||||
Map_info | Map | I | Position | 2.06656 | |||||
Positive | Positive_clone | C15A11 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
WBPaper00060343 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |