WormBase Tree Display for Gene: WBGene00000654
expand all nodes | collapse all nodes | view schema
| WBGene00000654 | Evidence | Person_evidence | WBPerson345 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson651 | |||||||||
| SMap | S_parent | Sequence | W07A12 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | col-78 | Person_evidence | WBPerson345 | |||||
| Sequence_name | W07A12.5 | ||||||||
| Molecular_name | W07A12.5 | ||||||||
| W07A12.5.1 | |||||||||
| CE03796 | |||||||||
| Other_name | CELE_W07A12.5 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | col-78 | ||||||||
| DB_info | Database | AceView | gene | 2J443 | |||||
| WormQTL | gene | WBGene00000654 | |||||||
| WormFlux | gene | WBGene00000654 | |||||||
| NDB | locus_tag | CELE_W07A12.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000654|UniProtKB=Q9U336 | |||||||
| family | PTHR24023 | ||||||||
| NCBI | gene | 189274 | |||||||
| RefSeq | protein | NM_001377833.2 | |||||||
| TrEMBL | UniProtAcc | Q9U336 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U336 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | col | ||||||||
| Allele (38) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00099941 | ||||||||
| 00099942 | |||||||||
| Ortholog (19) | |||||||||
| Paralog (161) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W07A12.5 | |||||||
| Corresponding_CDS_history | W07A12.5:wp136 | ||||||||
| W07A12.5:wp274 | |||||||||
| Corresponding_transcript | W07A12.5.1 | ||||||||
| Associated_feature | WBsf658058 | ||||||||
| WBsf988966 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00019685 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054926 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019707 | ||||||||
| Expr1158466 | |||||||||
| Expr2010425 | |||||||||
| Expr2028666 | |||||||||
| Drives_construct | WBCnstr00037396 | ||||||||
| Construct_product | WBCnstr00037396 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (43) | |||||||||
| SAGE_tag | SAGE:cgttcaagtgcatcttg | Strand | Antisense | ||||||
| SAGE:ttcacaagga | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| Interaction (54) | |||||||||
| Map_info | Map | II | Position | 1.05079 | Error | 0.001322 | |||
| Positive | Positive_clone | W07A12 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
