WormBase Tree Display for Gene: WBGene00000662
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| WBGene00000662 | Evidence | Person_evidence | WBPerson345 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson651 | |||||||||
| SMap | S_parent | Sequence | Y39G8C | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | col-87 | Person_evidence | WBPerson345 | |||||
| Sequence_name | Y39G8C.4 | ||||||||
| Molecular_name | Y39G8C.4 | ||||||||
| Y39G8C.4.1 | |||||||||
| CE43348 | |||||||||
| Other_name | CELE_Y39G8C.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | col-87 | ||||||||
| DB_info | Database | AceView | gene | 2O380 | |||||
| WormFlux | gene | WBGene00000662 | |||||||
| NDB | locus_tag | CELE_Y39G8C.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000662|UniProtKB=Q7YTG4 | |||||||
| family | PTHR24023 | ||||||||
| NCBI | gene | 3565880 | |||||||
| RefSeq | protein | NM_001027262.3 | |||||||
| TrEMBL | UniProtAcc | Q7YTG4 | |||||||
| UniProt_GCRP | UniProtAcc | Q7YTG4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | col | ||||||||
| Allele (170) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00082491 | ||||||||
| 00082492 | |||||||||
| Ortholog (30) | |||||||||
| Paralog (162) | |||||||||
| Structured_description | Automated_description | Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y39G8C.4 | |||||||
| Corresponding_CDS_history | Y39G8C.4:wp197 | ||||||||
| Corresponding_transcript | Y39G8C.4.1 | ||||||||
| Associated_feature | WBsf990622 | ||||||||
| WBsf990623 | |||||||||
| WBsf990624 | |||||||||
| WBsf990625 | |||||||||
| WBsf1013771 | |||||||||
| WBsf1013772 | |||||||||
| WBsf1013773 | |||||||||
| WBsf1013774 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00020426 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1020674 | ||||||||
| Expr1159777 | |||||||||
| Expr2010433 | |||||||||
| Expr2028673 | |||||||||
| Drives_construct | WBCnstr00037389 | ||||||||
| Construct_product | WBCnstr00037389 | ||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (48) | |||||||||
| Interaction | WBInteraction000445165 | ||||||||
| WBInteraction000464193 | |||||||||
| WBInteraction000467045 | |||||||||
| WBInteraction000469248 | |||||||||
| WBInteraction000469442 | |||||||||
| WBInteraction000471919 | |||||||||
| WBInteraction000473739 | |||||||||
| Map_info | Map | II | Position | 22.4095 | Error | 0.003483 | |||
| Positive | Positive_clone | Y39G8C | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00061616 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
