WormBase Tree Display for Gene: WBGene00000695
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| WBGene00000695 | Evidence | Person_evidence | WBPerson345 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson651 | |||||||||
| SMap | S_parent | Sequence | F56D5 | ||||||
| Identity | Version | 2 | |||||||
| Name | CGC_name | col-121 | Person_evidence | WBPerson345 | |||||
| Sequence_name | F56D5.1 | ||||||||
| Molecular_name | F56D5.1 | ||||||||
| F56D5.1.1 | |||||||||
| CE05967 | |||||||||
| Other_name | bis-1 | Paper_evidence | WBPaper00026902 | ||||||
| CELE_F56D5.1 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | col-121 | ||||||||
| DB_info | Database | AceView | gene | 4K160 | |||||
| WormQTL | gene | WBGene00000695 | |||||||
| WormFlux | gene | WBGene00000695 | |||||||
| NDB | locus_tag | CELE_F56D5.1 | |||||||
| NCBI | gene | 177771 | |||||||
| RefSeq | protein | NM_069254.5 | |||||||
| TrEMBL | UniProtAcc | Q20880 | |||||||
| UniProt_GCRP | UniProtAcc | Q20880 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 15 Jun 2006 11:46:22 | WBPerson2970 | Name_change | Other_name | bis-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | col | ||||||||
| Allele (17) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00069452 | ||||||||
| 00069453 | |||||||||
| 00069454 | |||||||||
| 00107687 | |||||||||
| Ortholog (30) | |||||||||
| Paralog (162) | |||||||||
| Structured_description | Concise_description | col-121 encodes a cuticle collagen required for resistance to theendocrine disrupting chemical bisphenol A (BPA); col-121(nx3) andcol-121(RNAi) animals are hypersensitive to BPA, but are otherwisewild-type (e.g., they have normal body shape); BPA hypersensitivity hasalso been observed for dpy-2(e8), dpy-7(e88) and dpy-10(e128) mutants. | Paper_evidence | WBPaper00024920 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 11 Aug 2006 00:00:00 | ||||||||
| Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. Expressed in hyp7 syncytium. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F56D5.1 | |||||||
| Corresponding_transcript | F56D5.1.1 | ||||||||
| Other_sequence | CJC12671_1 | ||||||||
| Dviv_isotig35010 | |||||||||
| CK726314.1 | |||||||||
| CR01015 | |||||||||
| CRC01170_1 | |||||||||
| Associated_feature | WBsf652058 | ||||||||
| WBsf667679 | |||||||||
| WBsf668153 | |||||||||
| WBsf668154 | |||||||||
| WBsf668155 | |||||||||
| WBsf230562 | |||||||||
| WBsf230563 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00059922 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00033336 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048710 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015822 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00063132 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3166 | ||||||||
| Expr13627 | |||||||||
| Expr1018030 | |||||||||
| Expr1030416 | |||||||||
| Expr1152459 | |||||||||
| Expr2010318 | |||||||||
| Expr2028562 | |||||||||
| Drives_construct | WBCnstr00011186 | ||||||||
| WBCnstr00037361 | |||||||||
| WBCnstr00039887 | |||||||||
| Construct_product | WBCnstr00037361 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (166) | |||||||||
| Interaction (139) | |||||||||
| Map_info | Map | IV | Position | 4.23514 | Error | 0.008493 | |||
| Positive | Positive_clone | F56D5 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 5448 | |||||||
| 4417 | |||||||||
| 5559 | |||||||||
| 5560 | |||||||||
| 5561 | |||||||||
| 5682 | |||||||||
| 5683 | |||||||||
| 5684 | |||||||||
| Reference | WBPaper00024920 | ||||||||
| WBPaper00026902 | |||||||||
| WBPaper00055356 | |||||||||
| Method | Gene |
