WormBase Tree Display for Gene: WBGene00000746
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| WBGene00000746 | Evidence | Person_evidence | WBPerson345 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson651 | |||||||||
| SMap | S_parent | Sequence | F41C6 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | col-173 | Person_evidence | WBPerson345 | |||||
| Sequence_name | F41C6.5 | ||||||||
| Molecular_name | F41C6.5 | ||||||||
| F41C6.5.1 | |||||||||
| CE04542 | |||||||||
| Other_name | CELE_F41C6.5 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | col-173 | ||||||||
| DB_info | Database | AceView | gene | XH494 | |||||
| WormQTL | gene | WBGene00000746 | |||||||
| WormFlux | gene | WBGene00000746 | |||||||
| NDB | locus_tag | CELE_F41C6.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000746|UniProtKB=Q20270 | |||||||
| family | PTHR24637 | ||||||||
| NCBI | gene | 180960 | |||||||
| RefSeq | protein | NM_076761.5 | |||||||
| TrEMBL | UniProtAcc | Q20270 | |||||||
| UniProt_GCRP | UniProtAcc | Q20270 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | col | ||||||||
| Allele (54) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00067656 | ||||||||
| 00067657 | |||||||||
| 00067658 | |||||||||
| 00107733 | |||||||||
| Ortholog (25) | |||||||||
| Paralog (161) | |||||||||
| Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F41C6.5 | |||||||
| Corresponding_transcript | F41C6.5.1 | ||||||||
| Other_sequence | CJC08519_1 | ||||||||
| EX543500.1 | |||||||||
| CJC08539_1 | |||||||||
| Associated_feature | WBsf1005668 | ||||||||
| WBsf1005669 | |||||||||
| WBsf1005670 | |||||||||
| WBsf1023152 | |||||||||
| WBsf237528 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00046968 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014735 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032080 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017178 | ||||||||
| Expr1150831 | |||||||||
| Expr2010367 | |||||||||
| Expr2028610 | |||||||||
| Drives_construct | WBCnstr00037312 | ||||||||
| Construct_product | WBCnstr00037312 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (214) | |||||||||
| Interaction (223) | |||||||||
| Map_info | Map | X | Position | -2.22284 | |||||
| Positive | Positive_clone | F41C6 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064788 | |||||||||
| WBPaper00065080 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
