WormBase Tree Display for Gene: WBGene00000773
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| WBGene00000773 | Evidence | Person_evidence | WBPerson71 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson395 | |||||||||
| SMap | S_parent | Sequence | F28C6 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | cpf-1 | Person_evidence | WBPerson71 | |||||
| Sequence_name | F28C6.3 | ||||||||
| Molecular_name | F28C6.3 | ||||||||
| F28C6.3.1 | |||||||||
| CE03274 | |||||||||
| Other_name | CELE_F28C6.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | cpf-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cpf | ||||||||
| Allele (28) | |||||||||
| Strain | WBStrain00037699 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00066154 | ||||||||
| 00066155 | |||||||||
| 00066156 | |||||||||
| 00066157 | |||||||||
| 00107773 | |||||||||
| 00107774 | |||||||||
| Contained_in_operon | CEOP2674 | ||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00012858 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Predicted to be involved in mRNA 3'-end processing. Predicted to be located in nucleus. Predicted to be part of mRNA cleavage stimulating factor complex. Is an ortholog of human CSTF1 (cleavage stimulation factor subunit 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F28C6.3 | |||||||
| Corresponding_transcript | F28C6.3.1 | ||||||||
| Other_sequence (97) | |||||||||
| Associated_feature | WBsf650344 | ||||||||
| WBsf223520 | |||||||||
| WBsf223521 | |||||||||
| Experimental_info | RNAi_result (16) | ||||||||
| Expr_pattern | Expr1026154 | ||||||||
| Expr1030477 | |||||||||
| Expr1149724 | |||||||||
| Expr2010480 | |||||||||
| Expr2028720 | |||||||||
| Drives_construct | WBCnstr00037288 | ||||||||
| Construct_product | WBCnstr00037288 | ||||||||
| Antibody | WBAntibody00002702 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (160) | |||||||||
| Interaction (131) | |||||||||
| Map_info | Map | II | Position | 0.824213 | Error | 0.000496 | |||
| Positive | Positive_clone | F28C6 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00006292 | ||||||||
| WBPaper00022812 | |||||||||
| WBPaper00032289 | |||||||||
| WBPaper00036019 | |||||||||
| WBPaper00036363 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00053568 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00058884 | |||||||||
| WBPaper00060756 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
