WormBase Tree Display for Gene: WBGene00000932
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| WBGene00000932 | SMap | S_parent | Sequence | T05G5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | dao-6 | Person_evidence | WBPerson359 | |||||
| Sequence_name | T05G5.12 | ||||||||
| Molecular_name | T05G5.12 | ||||||||
| T05G5.12.1 | |||||||||
| CE31363 | |||||||||
| T05G5.12.2 | |||||||||
| Other_name | CELE_T05G5.12 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | dao-6 | ||||||||
| DB_info | Database | AceView | gene | 3K824 | |||||
| WormQTL | gene | WBGene00000932 | |||||||
| WormFlux | gene | WBGene00000932 | |||||||
| NDB | locus_tag | CELE_T05G5.12 | |||||||
| NCBI | gene | 3564991 | |||||||
| RefSeq | protein | NM_001392179.1 | |||||||
| TrEMBL | UniProtAcc | Q8MPY0 | |||||||
| UniProt_GCRP | UniProtAcc | Q8MPY0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dao | ||||||||
| Allele (16) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP3891 | ||||||||
| Ortholog (12) | |||||||||
| Structured_description | Concise_description | dao-6 encodes a small (92-residue) and probably non-globular protein; dao-6 is negatively regulated by DAF-2 but positively regulated by DAF-16, and thus might be involved in the extended lifespan caused by daf-2(m41). | Paper_evidence | WBPaper00005073 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in several structures, including ABalppppaa; anterior arcade cell; excretory cell; head mesodermal cell; and pharyngeal cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray and RNA-seq studies. Is affected by twelve chemicals including Cadmium Chloride; Sodium Chloride; and Psoralens based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T05G5.12 | |||||||
| Corresponding_transcript | T05G5.12.1 | ||||||||
| T05G5.12.2 | |||||||||
| Other_sequence | FD514265.1 | ||||||||
| CSC01250_1 | |||||||||
| Associated_feature | WBsf651397 | ||||||||
| WBsf651398 | |||||||||
| WBsf993780 | |||||||||
| WBsf993781 | |||||||||
| WBsf993782 | |||||||||
| WBsf993783 | |||||||||
| WBsf1015664 | |||||||||
| WBsf1015665 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052558 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1015818 | ||||||||
| Expr1156179 | |||||||||
| Expr2010790 | |||||||||
| Expr2029027 | |||||||||
| Drives_construct | WBCnstr00037192 | ||||||||
| Construct_product | WBCnstr00037192 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (170) | |||||||||
| Interaction | WBInteraction000003948 | ||||||||
| WBInteraction000030218 | |||||||||
| WBInteraction000133987 | |||||||||
| WBInteraction000133990 | |||||||||
| WBInteraction000133994 | |||||||||
| WBInteraction000133995 | |||||||||
| WBInteraction000165670 | |||||||||
| WBInteraction000254697 | |||||||||
| WBInteraction000501756 | |||||||||
| WBInteraction000541708 | |||||||||
| Map_info | Map | III | Position | 0.929489 | Error | 0.00205 | |||
| Positive | Positive_clone | T05G5 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005073 | ||||||||
| WBPaper00017047 | |||||||||
| Remark | Sequence connection from [Yu H, Larsen PL], [krb 020711] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
