WormBase Tree Display for Gene: WBGene00000935
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WBGene00000935 | SMap | S_parent | Sequence | F56D1 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | daz | ||||||
Allele (32) | |||||||
Legacy_information | [Sugimoto A] encodes a protein similar to human DAZ (Deleted in Azoospermia), includes a RNP-type RNA-binding motif and a DAZ-family-specific motif, tj3 (deletion allele) is defective in progression of meiosis during oogenesis, spermatogenesis unaffected. | ||||||
Strain | WBStrain00033879 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (12) | |||||||
Ortholog (36) | |||||||
Structured_description | Concise_description | daz-1 encodes a protein containing an RNA recognition motif that is required for the progression of meiosis during oogenesis; DAZ-1 is expressed in the germline, and expression levels peak in the proximal pachytene region; cpb-3(bt17);daz-1(tj3) hermaphrodites have a synthetic phenotype of total sterility and masculinization; DAZ-1 colocalizes with CPB-3 invivo, coimmunoprecipitates with CPB-3, and binds CPB-3 in two-hybrid assays. | Paper_evidence | WBPaper00003942 | |||
WBPaper00027619 | |||||||
Curator_confirmed | WBPerson48 | ||||||
WBPerson567 | |||||||
Date_last_updated | 19 Apr 2007 00:00:00 | ||||||
Automated_description | Predicted to enable mRNA 3'-UTR binding activity and translation activator activity. Predicted to be involved in 3'-UTR-mediated mRNA stabilization and positive regulation of translational initiation. Located in cytoplasm. Expressed in germ line; gonad; and in male. Is an ortholog of several human genes including DAZ1 (deleted in azoospermia 1); DAZ2 (deleted in azoospermia 2); and DAZ3 (deleted in azoospermia 3). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F56D1.7 | |||||
Corresponding_transcript | F56D1.7.1 | ||||||
Other_sequence (103) | |||||||
Associated_feature | WBsf987888 | ||||||
WBsf987889 | |||||||
WBsf987890 | |||||||
WBsf987891 | |||||||
WBsf1012231 | |||||||
Experimental_info | RNAi_result | WBRNAi00048685 | Inferred_automatically | RNAi_primary | |||
WBRNAi00008878 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00048687 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00071139 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr964 | ||||||
Expr2818 | |||||||
Expr3154 | |||||||
Expr7850 | |||||||
Expr1011853 | |||||||
Expr1030582 | |||||||
Expr1152445 | |||||||
Expr2010796 | |||||||
Expr2029033 | |||||||
Drives_construct | WBCnstr00000165 | ||||||
WBCnstr00005257 | |||||||
WBCnstr00015766 | |||||||
WBCnstr00015767 | |||||||
WBCnstr00037189 | |||||||
Construct_product | WBCnstr00000165 | ||||||
WBCnstr00005239 | |||||||
WBCnstr00037189 | |||||||
Antibody | WBAntibody00000825 | ||||||
Microarray_results (21) | |||||||
Expression_cluster (211) | |||||||
Interaction (29) | |||||||
WBProcess | WBbiopr:00000068 | ||||||
Map_info | Map | II | Position | -1.40837 | Error | 0.030556 | |
Positive | Positive_clone | F56D1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 4253 | |||||
4538 | |||||||
Pseudo_map_position | |||||||
Reference (36) | |||||||
Remark | Sequence connection updated to .7 rather than .5 following advice of Danielle Thierry-Mieg. 02/06/12 krb. | ||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |