WormBase Tree Display for Gene: WBGene00000985

WBGene00000985 SMap: S_parent: Sequence: C15H11
  Identity: Version: 1
    Name: CGC_name: dhs-22 Person_evidence: WBPerson651
      Sequence_name: C15H11.4
      Molecular_name: C15H11.4
        C15H11.4.1
        CE08181
      Other_name: CELE_C15H11.4 Accession_evidence: NDB BX284605
      Public_name: dhs-22
    DB_info: Database: AceView gene 5O900
        WormQTL gene WBGene00000985
        WormFlux gene WBGene00000985
        NDB locus_tag CELE_C15H11.4
        Panther gene CAEEL|WormBase=WBGene00000985|UniProtKB=Q9XVS9
          family PTHR43157
        NCBI gene 179940
        RefSeq protein NM_074169.8
        TrEMBL UniProtAcc Q9XVS9
        UniProt_GCRP UniProtAcc Q9XVS9
        OMIM gene 608830
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:22 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dhs
    Allele (27)
    Strain: WBStrain00037761
    RNASeq_FPKM (74)
    GO_annotation: 00102828
      00102829
    Contained_in_operon: CEOP5416
    Ortholog (84)
    Paralog: WBGene00000987 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00000965 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000971 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000972 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00007780 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00010762 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00017082 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00017131 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00017971 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00021367 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: dhs-22 encodes a short-chain dehydrogenase predicted to be mitochondrial. Paper_evidence: WBPaper00004424
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to be located in membrane. Human ortholog(s) of this gene implicated in Leber congenital amaurosis 13 and Leber hereditary optic neuropathy. Is an ortholog of several human genes including RDH11 (retinol dehydrogenase 11); RDH12 (retinol dehydrogenase 12); and RDH13 (retinol dehydrogenase 13). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:705 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:19977)
      DOID:0110330 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:19977)
  Molecular_info: Corresponding_CDS: C15H11.4
    Corresponding_transcript: C15H11.4.1
    Other_sequence (76)
    Associated_feature: WBsf653382
      WBsf653383
      WBsf669651
      WBsf234944
  Experimental_info: RNAi_result: WBRNAi00082569 Inferred_automatically: RNAi_primary
      WBRNAi00000325 Inferred_automatically: RNAi_primary
      WBRNAi00040619 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1027834
      Expr1030613
      Expr1144677
      Expr2010906
      Expr2029145
    Microarray_results (20)
    Expression_cluster (93)
    Interaction (63)
  Map_info: Map: V Position: 6.30096 Error: 0.000616
    Positive: Positive_clone: C15H11 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027024
    WBPaper00038491
    WBPaper00042257
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene