WormBase Tree Display for Gene: WBGene00001062
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| WBGene00001062 | SMap | S_parent | Sequence | R10D12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | dpr-1 | Person_evidence | WBPerson539 | |||||
| Sequence_name | R10D12.2 | ||||||||
| Molecular_name | R10D12.2 | ||||||||
| R10D12.2.1 | |||||||||
| CE42540 | |||||||||
| Other_name | end-2 | ||||||||
| CELE_R10D12.2 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | dpr-1 | ||||||||
| DB_info | Database | AceView | gene | 5O422 | |||||
| WormQTL | gene | WBGene00001062 | |||||||
| WormFlux | gene | WBGene00001062 | |||||||
| NDB | locus_tag | CELE_R10D12.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001062|UniProtKB=Q9XVK1 | |||||||
| family | PTHR46397 | ||||||||
| NCBI | gene | 187759 | |||||||
| RefSeq | protein | NM_074056.4 | |||||||
| TREEFAM | TREEFAM_ID | TF321941 | |||||||
| TrEMBL | UniProtAcc | Q9XVK1 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XVK1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dpr | ||||||||
| Allele (37) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00102559 | ||||||||
| 00102560 | |||||||||
| 00102561 | |||||||||
| 00102562 | |||||||||
| 00108184 | |||||||||
| 00108185 | |||||||||
| 00108186 | |||||||||
| 00108187 | |||||||||
| Ortholog (30) | |||||||||
| Paralog (225) | |||||||||
| Structured_description | Concise_description | dpr-1 encodes a nuclear hormone receptor; dpr-1 may play a role in endoderm development. | Paper_evidence | WBPaper00035290 | |||||
| WBPaper00002939 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| WBPerson1843 | |||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 08 Aug 2012 00:00:00 | ||||||||
| Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R10D12.2 | |||||||
| Corresponding_CDS_history | R10D12.2:wp189 | ||||||||
| Corresponding_transcript | R10D12.2.1 | ||||||||
| Other_sequence | CBC06739_1 | ||||||||
| Associated_feature | WBsf978687 | ||||||||
| WBsf234881 | |||||||||
| WBsf234882 | |||||||||
| Transcription_factor | WBTranscriptionFactor000474 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00112729 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00051684 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017692 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00112730 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025559 | ||||||||
| Expr1155359 | |||||||||
| Expr2011053 | |||||||||
| Expr2029290 | |||||||||
| Drives_construct | WBCnstr00037108 | ||||||||
| Construct_product | WBCnstr00014637 | ||||||||
| WBCnstr00037108 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (24) | |||||||||
| Interaction (80) | |||||||||
| Map_info | Map | V | Position | 5.82958 | Error | 0.004885 | |||
| Positive | Positive_clone | R10D12 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4287 | |||||||
| 5078 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (15) | |||||||||
| Remark | Sequence connection from [Newman-Smith E, Rothman JH]. krb 13/11/01 | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
