WormBase Tree Display for Gene: WBGene00001079
expand all nodes | collapse all nodes | view schema
WBGene00001079 | SMap | S_parent | Sequence | T22B3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name (5) | |||||||||
DB_info | Database | AceView | gene | 4M462 | |||||
WormQTL | gene | WBGene00001079 | |||||||
WormFlux | gene | WBGene00001079 | |||||||
NDB | locus_tag | CELE_T22B3.1 | |||||||
NCBI | gene | 178105 | |||||||
RefSeq | protein | NM_069814.6 | |||||||
SwissProt | UniProtAcc | P34807 | |||||||
TREEFAM | TREEFAM_ID | TF320341 | |||||||
UniProt_GCRP | UniProtAcc | P34807 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:23 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | dpy | ||||||||
Reference_allele | WBVar00143888 | ||||||||
Allele (68) | |||||||||
Legacy_information | e1282ts : medium dumpy (20x) weak dumpy (15x) strong dumpy round- nosed (25x). ES3 (25x all stages). ME2 (20x). NA4 (other alleles all strong dumpy (20x) almost inviable (15x) : e1362 e1415 e2017amber). | ||||||||
See also e1362, e1415, e1422, e2017, e2480, s1711, s1774, s1776, s2033 | |||||||||
[C.elegansII] e1282ts : medium dumpy (20C), weak dumpy (15C), strong dumpy, round-nosed (25C). TSPduring L1 and L2 stages. ES3 (25C all stages). ME2 (20C). OA>10: other alleles mostly severe round-headed dumpy (20C), inviable or almost inviable (15C), e1362,e1415, cn142 (strongest allele), e2017amb (slightly weaker), cn322, etc. m474::Tc1 : strong dumpy, reverts to Dpy (m474s2033)or wild type (m474m495). Cloned: rare 1.9 kb RNA, most abundant in L2; encodes predicted 359aa novel protein. [Hosono et al. 1982; Clark et al. 1995; BC] | |||||||||
Strain (177) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00044559 | ||||||||
00044560 | |||||||||
00044561 | |||||||||
00044562 | |||||||||
00108206 | |||||||||
Ortholog (27) | |||||||||
Structured_description | Concise_description | dpy-20 encodes a BED zinc finger protein, with no known homologs outside of nematodes, that is required for normal body morphology. | Paper_evidence | WBPaper00000609 | |||||
WBPaper00002182 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enables sequence-specific double-stranded DNA binding activity. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T22B3.1 | |||||||
Corresponding_CDS_history | T22B3.1:wp166 | ||||||||
Corresponding_transcript | T22B3.1.1 | ||||||||
Other_sequence | EY467652.1 | ||||||||
ACC10421_1 | |||||||||
Dviv_isotig16525 | |||||||||
Dviv_isotig16524 | |||||||||
Acan_isotig18415 | |||||||||
Associated_feature | WBsf668360 | ||||||||
WBsf997910 | |||||||||
WBsf997911 | |||||||||
WBsf997912 | |||||||||
WBsf1018244 | |||||||||
WBsf1018245 | |||||||||
WBsf1018246 | |||||||||
Transcription_factor | WBTranscriptionFactor000478 | ||||||||
Experimental_info | RNAi_result (17) | ||||||||
Expr_pattern | Expr1012656 | ||||||||
Expr1157340 | |||||||||
Expr2011063 | |||||||||
Expr2029300 | |||||||||
Drives_construct | WBCnstr00006715 | ||||||||
WBCnstr00006803 | |||||||||
WBCnstr00019441 | |||||||||
WBCnstr00037093 | |||||||||
Construct_product | WBCnstr00006715 | ||||||||
WBCnstr00006803 | |||||||||
WBCnstr00007882 | |||||||||
WBCnstr00019441 | |||||||||
WBCnstr00037093 | |||||||||
Microarray_results (21) | |||||||||
Expression_cluster (184) | |||||||||
Interaction (39) | |||||||||
Map_info (6) | |||||||||
Reference (108) | |||||||||
Method | Gene |