WormBase Tree Display for Gene: WBGene00001158
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WBGene00001158 | Evidence | Person_evidence | WBPerson3205 | ||||||
---|---|---|---|---|---|---|---|---|---|
Author_evidence | Van Gilst M | ||||||||
SMap | S_parent | Sequence | F01G10 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | ech-9 | |||||||
Sequence_name | F01G10.3 | ||||||||
Molecular_name | F01G10.3a | ||||||||
F01G10.3a.1 | |||||||||
CE35451 | |||||||||
F01G10.3b | |||||||||
CE49962 | |||||||||
F01G10.3b.1 | |||||||||
Other_name | CELE_F01G10.3 | Accession_evidence | NDB | BX284604 | |||||
Public_name | ech-9 | ||||||||
DB_info | Database | AceView | gene | 4K998 | |||||
WormQTL | gene | WBGene00001158 | |||||||
WormFlux | gene | WBGene00001158 | |||||||
NDB | locus_tag | CELE_F01G10.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00001158|UniProtKB=O17762 | |||||||
family | PTHR23309 | ||||||||
NCBI | gene | 184065 | |||||||
RefSeq | protein | NM_069474.6 | |||||||
NM_001380437.1 | |||||||||
TrEMBL | UniProtAcc | A0A061AKU6 | |||||||
O17762 | |||||||||
UniProt_GCRP | UniProtAcc | O17762 | |||||||
OMIM | gene | 607037 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:23 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ech | ||||||||
Allele (45) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00000391 | ||||||||
00000392 | |||||||||
00000393 | |||||||||
00030660 | |||||||||
00108339 | |||||||||
00108340 | |||||||||
00108341 | |||||||||
00108342 | |||||||||
Ortholog (29) | |||||||||
Paralog | WBGene00001157 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00001150 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00007129 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00010035 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00019978 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00020347 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00022130 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable 3-hydroxyacyl-CoA dehydrogenase activity. Predicted to be involved in fatty acid beta-oxidation. Predicted to be located in peroxisome. Human ortholog(s) of this gene implicated in Fanconi renotubular syndrome 3. Is an ortholog of human EHHADH (enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:0080759 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3247) | ||||
Molecular_info | Corresponding_CDS | F01G10.3a | |||||||
F01G10.3b | |||||||||
Corresponding_CDS_history | F01G10.3:wp109 | ||||||||
Corresponding_transcript | F01G10.3a.1 | ||||||||
F01G10.3b.1 | |||||||||
Other_sequence | CRC08797_1 | ||||||||
FG980875.1 | |||||||||
HBC12703_1 | |||||||||
Tcol_isotig17282 | |||||||||
CR12067 | |||||||||
Tcir_isotig23141 | |||||||||
Tcol_isotig21554 | |||||||||
Associated_feature | WBsf230703 | ||||||||
Experimental_info | RNAi_result | WBRNAi00030549 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00082449 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00102620 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00012745 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00043765 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1015628 | ||||||||
Expr1147743 | |||||||||
Expr2011173 | |||||||||
Expr2029409 | |||||||||
Drives_construct | WBCnstr00037058 | ||||||||
Construct_product | WBCnstr00037058 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (337) | |||||||||
Interaction (35) | |||||||||
Map_info | Map | IV | Position | 4.56237 | |||||
Positive | Positive_clone | F01G10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (12) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |