WormBase Tree Display for Gene: WBGene00001209
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| WBGene00001209 | SMap | S_parent | Sequence | C27D11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | egl-45 | Person_evidence | WBPerson268 | |||||
| Sequence_name | C27D11.1 | ||||||||
| Molecular_name | C27D11.1 | ||||||||
| C27D11.1.1 | |||||||||
| CE00543 | |||||||||
| Other_name | eif-3.A | Person_evidence | WBPerson599 | ||||||
| CELE_C27D11.1 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | egl-45 | ||||||||
| DB_info | Database | AceView | gene | 3I914 | |||||
| WormQTL | gene | WBGene00001209 | |||||||
| WormFlux | gene | WBGene00001209 | |||||||
| NDB | locus_tag | CELE_C27D11.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001209|UniProtKB=P34339 | |||||||
| family | PTHR14005 | ||||||||
| NCBI | gene | 176094 | |||||||
| RefSeq | protein | NM_066297.7 | |||||||
| SwissProt | UniProtAcc | P34339 | |||||||
| TREEFAM | TREEFAM_ID | TF101522 | |||||||
| UniProt_GCRP | UniProtAcc | P34339 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:23 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | egl | ||||||||
| Reference_allele | WBVar00089875 | ||||||||
| Allele (48) | |||||||||
| Legacy_information | n999 : moderate bloating Type B HSN cell bodies sometimes degenerate in L4 absent in adult and never contain serotonin. ES2 (adult) ES1 (other stages). NA1. | ||||||||
| See also n999 | |||||||||
| [C.elegansII] n999 : moderate bloating; stimulated by serotonin, not imipramine; HSN cell bodies sometimes degenerate in L4, absent in adult and never contain serotonin; Unc;axon defects; some sterility. n999/Df often very unhealthy, slow, sterile. HSN degeneration is suppressed by unc-76 and unc-42 mutations.ES2 (adult) ES1 (other stages). ME1 (variable morpho-Mab: posterior bulges in fan, some spicule and muscle defects). NA1. Cloned: encodes novel predicted protein. [Desai and Horvitz 1989; MT] | |||||||||
| Strain | WBStrain00026928 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (26) | |||||||||
| Ortholog (41) | |||||||||
| Structured_description | Automated_description | Predicted to enable mRNA binding activity and translation regulator activity. Predicted to contribute to translation initiation factor activity. Involved in egg-laying behavior and embryo development. Predicted to be located in cytoplasm. Predicted to be part of eukaryotic translation initiation factor 3 complex, eIF3e; eukaryotic translation initiation factor 3 complex, eIF3m; and multi-eIF complex. Expressed in neurons. Is an ortholog of human EIF3A (eukaryotic translation initiation factor 3 subunit A). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C27D11.1 | |||||||
| Corresponding_transcript | C27D11.1.1 | ||||||||
| Other_sequence (40) | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result (26) | ||||||||
| Expr_pattern | Expr4580 | ||||||||
| Expr1025512 | |||||||||
| Expr1030768 | |||||||||
| Expr1145380 | |||||||||
| Expr2011224 | |||||||||
| Expr2029460 | |||||||||
| Drives_construct | WBCnstr00012089 | ||||||||
| WBCnstr00037032 | |||||||||
| Construct_product | WBCnstr00037032 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (141) | |||||||||
| Interaction (300) | |||||||||
| Map_info | Map | III | Position | -0.581896 | Error | 0.000348 | |||
| Well_ordered | |||||||||
| Positive | Positive_clone | C27D11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| T17D7 | |||||||||
| Mapping_data | 2_point | 1626 | |||||||
| Multi_point | 870 | ||||||||
| 1401 | |||||||||
| 1402 | |||||||||
| 1403 | |||||||||
| 4206 | |||||||||
| Reference (24) | |||||||||
| Method | Gene |
