WormBase Tree Display for Gene: WBGene00001494
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| WBGene00001494 | SMap | S_parent | Sequence | H09G03 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | frm-8 | Person_evidence | WBPerson204 | |||||
| Sequence_name | H09G03.2 | ||||||||
| Molecular_name | H09G03.2a | ||||||||
| H09G03.2a.1 | |||||||||
| CE31024 | |||||||||
| H09G03.2b | |||||||||
| CE31025 | |||||||||
| H09G03.2c | |||||||||
| CE32455 | |||||||||
| H09G03.2b.1 | |||||||||
| H09G03.2c.1 | |||||||||
| Other_name | CELE_H09G03.2 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | frm-8 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | frm | ||||||||
| Allele (521) | |||||||||
| Strain | WBStrain00032198 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (40) | |||||||||
| Structured_description | Concise_description | frm-8 encodes a protein containing a WW domain, a PDZ domain, and a FERM domain and has homology to the human predicted protein KIAA0316. | Curator_confirmed | WBPerson48 | |||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Expressed in PVDL and PVDR. Human ortholog(s) of this gene implicated in non-syndromic X-linked intellectual disability 104. Human FRMPD4 enables phosphatidylinositol-4,5-bisphosphate binding activity. Is predicted to encode a protein with the following domains: WW domain; Ras association (RalGDS/AF-6) domain; FERM central domain; FERM superfamily, second domain; FERM/acyl-CoA-binding protein superfamily; Ubiquitin-like domain superfamily; PDZ superfamily; Band 4.1 domain; and PDZ domain. Is an ortholog of human FRMPD1 (FERM and PDZ domain containing 1); FRMPD3 (FERM and PDZ domain containing 3); and FRMPD4 (FERM and PDZ domain containing 4). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0112018 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29007) | ||||
| Molecular_info | Corresponding_CDS | H09G03.2a | |||||||
| H09G03.2b | |||||||||
| H09G03.2c | |||||||||
| Corresponding_transcript | H09G03.2a.1 | ||||||||
| H09G03.2b.1 | |||||||||
| H09G03.2c.1 | |||||||||
| Other_sequence (28) | |||||||||
| Associated_feature | WBsf716537 | ||||||||
| WBsf991702 | |||||||||
| WBsf991703 | |||||||||
| WBsf991704 | |||||||||
| WBsf1014526 | |||||||||
| WBsf1014527 | |||||||||
| WBsf226326 | |||||||||
| WBsf226327 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00060452 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00112669 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006540 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00060451 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00060449 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016222 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00049344 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00114833 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00060450 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr6274 | ||||||||
| Expr11989 | |||||||||
| Expr1013464 | |||||||||
| Expr1030895 | |||||||||
| Expr1153078 | |||||||||
| Expr2011890 | |||||||||
| Expr2030127 | |||||||||
| Drives_construct | WBCnstr00003127 | ||||||||
| Microarray_results (31) | |||||||||
| Expression_cluster (138) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Map | III | Position | -7.34667 | Error | 0.023656 | |||
| Positive | Positive_clone | H09G03 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024261 | ||||||||
| WBPaper00027555 | |||||||||
| WBPaper00032233 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | data submitted by [Gobel V] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
