WormBase Tree Display for Gene: WBGene00001550
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| WBGene00001550 | SMap | S_parent | Sequence | C06A12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gcy-27 | Person_evidence | WBPerson655 | |||||
| Sequence_name | C06A12.4 | ||||||||
| Molecular_name | C06A12.4a | ||||||||
| C06A12.4a.1 | |||||||||
| CE50575 | |||||||||
| C06A12.4b | |||||||||
| CE50588 | |||||||||
| C06A12.4b.1 | |||||||||
| Other_name | CELE_C06A12.4 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | gcy-27 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 23 Feb 2015 11:33:46 | WBPerson4025 | Event | Split_into | WBGene00255703 | ||||
| Split_into | WBGene00255703 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gcy | ||||||||
| Allele (83) | |||||||||
| Strain | WBStrain00029462 | ||||||||
| WBStrain00033296 | |||||||||
| WBStrain00037598 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (24) | |||||||||
| Ortholog (40) | |||||||||
| Paralog (37) | |||||||||
| Structured_description | Automated_description | Predicted to enable adenylate cyclase activity; guanylate cyclase activity; and peptide receptor activity. Involved in chemosensory behavior and sensory perception of bitter taste. Predicted to be located in plasma membrane. Expressed in amphid neurons and head mesodermal cell. Human ortholog(s) of this gene implicated in congenital diarrhea 6. Is an ortholog of human GUCY2C (guanylate cyclase 2C). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0060780 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4688) | ||||
| Molecular_info | Corresponding_CDS | C06A12.4a | |||||||
| C06A12.4b | |||||||||
| Corresponding_CDS_history | C06A12.4:wp52 | ||||||||
| C06A12.4:wp154 | |||||||||
| C06A12.4:wp179 | |||||||||
| Corresponding_transcript | C06A12.4a.1 | ||||||||
| C06A12.4b.1 | |||||||||
| Other_sequence | ACC19312_1 | ||||||||
| FC539805.1 | |||||||||
| Associated_feature | WBsf668590 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00010260 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00039813 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028529 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4541 | ||||||||
| Expr15360 | |||||||||
| Expr1028551 | |||||||||
| Expr1143894 | |||||||||
| Expr2011989 | |||||||||
| Drives_construct | WBCnstr00001526 | ||||||||
| WBCnstr00001527 | |||||||||
| WBCnstr00001534 | |||||||||
| WBCnstr00020615 | |||||||||
| WBCnstr00020616 | |||||||||
| WBCnstr00036870 | |||||||||
| Construct_product | WBCnstr00036870 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (44) | |||||||||
| Interaction | WBInteraction000127166 | ||||||||
| WBInteraction000142447 | |||||||||
| WBInteraction000152028 | |||||||||
| WBInteraction000195273 | |||||||||
| WBInteraction000217043 | |||||||||
| WBInteraction000271235 | |||||||||
| WBInteraction000305643 | |||||||||
| WBInteraction000438966 | |||||||||
| WBInteraction000449014 | |||||||||
| WBInteraction000569529 | |||||||||
| Map_info | Map | IV | Position | 17.0144 | Error | 0.038122 | |||
| Positive | Positive_clone | C06A12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024255 | ||||||||
| WBPaper00027040 | |||||||||
| WBPaper00027174 | |||||||||
| WBPaper00027258 | |||||||||
| WBPaper00043501 | |||||||||
| WBPaper00043948 | |||||||||
| WBPaper00052824 | |||||||||
| WBPaper00064039 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
