WormBase Tree Display for Gene: WBGene00001556
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| WBGene00001556 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | gcy-36 | Person_evidence | WBPerson655 | |||||
| Sequence_name | C46E1.2 | ||||||||
| Molecular_name | C46E1.2 | ||||||||
| C46E1.2.1 | |||||||||
| CE39007 | |||||||||
| Other_name | CeGC6 | Paper_evidence | WBPaper00003629 | ||||||
| CELE_C46E1.2 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | gcy-36 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gcy | ||||||||
| Allele (113) | |||||||||
| Strain | WBStrain00005284 | ||||||||
| WBStrain00040843 | |||||||||
| WBStrain00040845 | |||||||||
| WBStrain00032421 | |||||||||
| WBStrain00000305 | |||||||||
| WBStrain00000306 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (26) | |||||||||
| Ortholog (44) | |||||||||
| Paralog (36) | |||||||||
| Structured_description | Concise_description | gcy-36 encodes a soluble guanylate cyclase; GCY-36 activity is required in the URX sensory neurons to sense increases in O2 levels and effect corresponding behavioral changes; gcy-36 genetically interacts with npr-1 with respect to feeding behavior; a gcy-36 reporter fusion is expressed in the AQR, PQR, and URX neurons. | Paper_evidence | WBPaper00003992 | |||||
| WBPaper00024211 | |||||||||
| WBPaper00024217 | |||||||||
| WBPaper00033008 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| WBPerson1843 | |||||||||
| Date_last_updated | 24 Aug 2011 00:00:00 | ||||||||
| Automated_description | Enables oxygen sensor activity. Involved in feeding behavior and response to oxygen levels. Located in dendrite and neuronal cell body. Human ortholog(s) of this gene implicated in Alzheimer's disease. Is an ortholog of human GUCY1B2 (guanylate cyclase 1 soluble subunit beta 2 (pseudogene)). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:10652 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4687) | ||||
| Molecular_info | Corresponding_CDS | C46E1.2 | |||||||
| Corresponding_CDS_history | C46E1.2:wp88 | ||||||||
| C46E1.2:wp147 | |||||||||
| Corresponding_transcript | C46E1.2.1 | ||||||||
| Other_sequence | Oden_isotig27910 | ||||||||
| Tcol_isotig14310 | |||||||||
| Dviv_isotig29348 | |||||||||
| Oden_isotig25260 | |||||||||
| Associated_feature | WBsf648808 | ||||||||
| WBsf663641 | |||||||||
| WBsf1008231 | |||||||||
| WBsf1024599 | |||||||||
| WBsf236778 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00042594 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr2983 | ||||||||
| Expr2984 | |||||||||
| Expr2988 | |||||||||
| Expr15362 | |||||||||
| Expr1021093 | |||||||||
| Expr1146576 | |||||||||
| Expr2011997 | |||||||||
| Expr2030234 | |||||||||
| Drives_construct (19) | |||||||||
| Construct_product | WBCnstr00011063 | ||||||||
| WBCnstr00036864 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (99) | |||||||||
| Interaction (21) | |||||||||
| Anatomy_function | WBbtf0345 | ||||||||
| WBbtf0346 | |||||||||
| WBProcess | WBbiopr:00000054 | ||||||||
| WBbiopr:00000063 | |||||||||
| Map_info | Map | X | Position | 22.7022 | Error | 0.00809 | |||
| Positive | Positive_clone | C46E1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5186 | |||||||
| 4927 | |||||||||
| 5395 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (41) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
