WormBase Tree Display for Gene: WBGene00001738
expand all nodes | collapse all nodes | view schema
| WBGene00001738 | Evidence | Paper_evidence | WBPaper00003717 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T24A6 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | grl-29 | Person_evidence | WBPerson83 | |||||
| Sequence_name | T24A6.18 | ||||||||
| Molecular_name | T24A6.18 | ||||||||
| T24A6.18.1 | |||||||||
| CE28489 | |||||||||
| Other_name | CELE_T24A6.18 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | grl-29 | ||||||||
| DB_info | Database | AceView | gene | 5E34 | |||||
| WormQTL | gene | WBGene00001738 | |||||||
| WormFlux | gene | WBGene00001738 | |||||||
| NDB | locus_tag | CELE_T24A6.18 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001738|UniProtKB=O61948 | |||||||
| family | PTHR23261 | ||||||||
| NCBI | gene | 188835 | |||||||
| RefSeq | protein | NM_071596.1 | |||||||
| TREEFAM | TREEFAM_ID | TF317463 | |||||||
| TrEMBL | UniProtAcc | O61948 | |||||||
| UniProt_GCRP | UniProtAcc | O61948 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | grl | ||||||||
| Allele (21) | |||||||||
| Strain | WBStrain00033066 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (15) | |||||||||
| Paralog (32) | |||||||||
| Structured_description | Concise_description | grl-29 encodes a hedgehog-like protein, with an N-terminal signalsequence, a central low-complexity region, and a C-terminal Ground-like(Grl) domain; GRL-29 is expressed in larval neurons; the Grl domain ispredicted to form a cysteine-crosslinked protein involved inintercellular signalling, and it has subtle similarity to the N-terminalHedge domain of HEDGEHOG proteins. | Paper_evidence | WBPaper00003717 | |||||
| WBPaper00006525 | |||||||||
| WBPaper00026841 | |||||||||
| WBPaper00027263 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 05 Nov 2006 00:00:00 | ||||||||
| Automated_description | Expressed in rectal epithelium. Is predicted to encode a protein with the following domain: Ground-like domain. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T24A6.18 | |||||||
| Corresponding_transcript | T24A6.18.1 | ||||||||
| Other_sequence | GP03214 | ||||||||
| GO252185.1 | |||||||||
| AS01194 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00054004 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054005 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019125 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4464 | ||||||||
| Expr6756 | |||||||||
| Expr1012524 | |||||||||
| Expr1157550 | |||||||||
| Expr2012264 | |||||||||
| Expr2030500 | |||||||||
| Drives_construct | WBCnstr00003899 | ||||||||
| WBCnstr00012030 | |||||||||
| WBCnstr00036725 | |||||||||
| Construct_product | WBCnstr00036725 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (15) | |||||||||
| Interaction | WBInteraction000183964 | ||||||||
| WBInteraction000408515 | |||||||||
| Map_info | Map | V | Position | -8.75214 | Error | 0.01731 | |||
| Positive | Positive_clone | T24A6 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00003717 | ||||||||
| WBPaper00028754 | |||||||||
| WBPaper00031588 | |||||||||
| WBPaper00064105 | |||||||||
| Remark | Member of the GRound-Like (grd related) gene class. Ground-like gene contains ground-like domain, hedgehog-related | Paper_evidence | WBPaper00003717 | ||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
