WormBase Tree Display for Gene: WBGene00001812
expand all nodes | collapse all nodes | view schema
| WBGene00001812 | SMap | S_parent | Sequence | F43E2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | haf-2 | Person_evidence | WBPerson36 | |||||
| Sequence_name | F43E2.4 | ||||||||
| Molecular_name | F43E2.4 | ||||||||
| F43E2.4.1 | |||||||||
| CE51253 | |||||||||
| Other_name | CELE_F43E2.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | haf-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | haf | ||||||||
| Allele (39) | |||||||||
| Strain | WBStrain00035486 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (18) | |||||||||
| Ortholog (42) | |||||||||
| Paralog (23) | |||||||||
| Structured_description | Concise_description | haf-2 encodes a predicted transmembrane protein of the ATP-binding cassette (ABC) transporter superfamily; by homology, HAF-2 is proposed to function in ATP-dependent transport of molecules across plasma and intracellular membranes. | Paper_evidence | WBPaper00004424 | |||||
| WBPaper00005654 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 24 May 2010 00:00:00 | ||||||||
| Automated_description | Predicted to enable ATPase-coupled transmembrane transporter activity. Involved in regulatory ncRNA-mediated post-transcriptional gene silencing. Predicted to be located in membrane. Expressed in intestine and muscle cell. Is an ortholog of human ABCB9 (ATP binding cassette subfamily B member 9). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F43E2.4 | |||||||
| Corresponding_CDS_history | F43E2.4:wp252 | ||||||||
| Corresponding_transcript | F43E2.4.1 | ||||||||
| Other_sequence (53) | |||||||||
| Associated_feature | WBsf655369 | ||||||||
| WBsf665684 | |||||||||
| WBsf988419 | |||||||||
| WBsf988420 | |||||||||
| WBsf988421 | |||||||||
| WBsf988422 | |||||||||
| WBsf223329 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00047198 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00032188 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00081149 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022357 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1986 | ||||||||
| Expr3346 | |||||||||
| Expr6059 | |||||||||
| Expr1028892 | |||||||||
| Expr1031061 | |||||||||
| Expr1151059 | |||||||||
| Expr2012356 | |||||||||
| Expr2030592 | |||||||||
| Drives_construct | WBCnstr00002000 | ||||||||
| WBCnstr00011342 | |||||||||
| WBCnstr00036672 | |||||||||
| Construct_product | WBCnstr00036672 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (142) | |||||||||
| Interaction (54) | |||||||||
| Map_info | Map | II | Position | 0.502706 | Error | 0.000114 | |||
| Positive | Positive_clone | F43E2 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4151 | |||||||
| 4390 | |||||||||
| 5625 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (11) | |||||||||
| Remark | Sequence connection from Sheps JA and Baillie DL [021008 ck1] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
