WormBase Tree Display for Gene: WBGene00001814
expand all nodes | collapse all nodes | view schema
| WBGene00001814 | SMap | S_parent | Sequence | W04C9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | haf-4 | Person_evidence | WBPerson36 | |||||
| Sequence_name | W04C9.1 | ||||||||
| Molecular_name | W04C9.1a | ||||||||
| W04C9.1a.1 | |||||||||
| CE28355 | |||||||||
| W04C9.1b | |||||||||
| CE49215 | |||||||||
| W04C9.1b.1 | |||||||||
| Other_name | CELE_W04C9.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | haf-4 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | haf | ||||||||
| Allele (144) | |||||||||
| Strain | WBStrain00001134 | ||||||||
| WBStrain00002742 | |||||||||
| WBStrain00031784 | |||||||||
| WBStrain00035778 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (22) | |||||||||
| Ortholog (35) | |||||||||
| Paralog (23) | |||||||||
| Structured_description | Concise_description | haf-4 encodes a half-molecular ATP-binding cassette (ABC) transporters similar to the conserved half-type ATP-binding cassette (ABC) transporter, TAPL/ABCB9; in elegans, haf-4 along with another TAPL gene, haf-9 is required for the formation of intestinal organelles; haf-4 and haf-9 are required for proper growth, normal brood size and for the normal defecation cycle; haf-4 and haf-9 are localized to intestinal organelles and physically interact to form a heterodimer. | Paper_evidence | WBPaper00028970 | |||||
| WBPaper00033097 | |||||||||
| WBPaper00042080 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| WBPerson1843 | |||||||||
| WBPerson324 | |||||||||
| Date_last_updated | 09 Sep 2013 00:00:00 | ||||||||
| Automated_description | Predicted to enable ATPase-coupled transmembrane transporter activity. Involved in lipid metabolic process and lysosomal transport. Located in lysosomal membrane. Human ortholog(s) of this gene implicated in several diseases, including autoimmune disease (multiple); bronchial disease (multiple); and lung disease (multiple). Is an ortholog of human ABCB9 (ATP binding cassette subfamily B member 9). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model (17) | ||||||||
| Molecular_info | Corresponding_CDS | W04C9.1a | |||||||
| W04C9.1b | |||||||||
| Corresponding_CDS_history | W04C9.1b:wp124 | ||||||||
| Corresponding_transcript | W04C9.1a.1 | ||||||||
| W04C9.1b.1 | |||||||||
| Other_sequence (48) | |||||||||
| Associated_feature | WBsf643014 | ||||||||
| WBsf655845 | |||||||||
| WBsf217135 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00026481 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00004419 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021246 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00026480 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00069350 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00091096 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00069351 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054758 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (12) | |||||||||
| Drives_construct | WBCnstr00002016 | ||||||||
| WBCnstr00002017 | |||||||||
| WBCnstr00003273 | |||||||||
| WBCnstr00011343 | |||||||||
| WBCnstr00011915 | |||||||||
| WBCnstr00013652 | |||||||||
| Construct_product | WBCnstr00013652 | ||||||||
| Antibody | WBAntibody00001952 | ||||||||
| WBAntibody00002421 | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (227) | |||||||||
| Interaction (75) | |||||||||
| Map_info | Map | I | Position | -18.9981 | Error | 0.007263 | |||
| Positive | Positive_clone | W04C9 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4391 | |||||||
| 4732 | |||||||||
| 5001 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (22) | |||||||||
| Remark | Sequence connection from Sheps JA and Baillie DL [021008 ck1] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
