WormBase Tree Display for Gene: WBGene00001894
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| WBGene00001894 | SMap | S_parent | Sequence | K06C4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | his-20 | Person_evidence | WBPerson160 | |||||
| Sequence_name | K06C4.4 | ||||||||
| Molecular_name | K06C4.4 | ||||||||
| K06C4.4.1 | |||||||||
| CE10538 | |||||||||
| Other_name | CELE_K06C4.4 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | his-20 | ||||||||
| DB_info | Database | AceView | gene | 5J374 | |||||
| WormFlux | gene | WBGene00001894 | |||||||
| NDB | locus_tag | CELE_K06C4.4 | |||||||
| NCBI | gene | 191675 | |||||||
| RefSeq | protein | NM_072894.1 | |||||||
| SwissProt | UniProtAcc | Q27894 | |||||||
| UniProt_GCRP | UniProtAcc | Q27894 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | his | ||||||||
| Allele | WBVar01499903 | ||||||||
| WBVar01500129 | |||||||||
| WBVar01499419 | |||||||||
| WBVar01499420 | |||||||||
| WBVar01499056 | |||||||||
| WBVar01499316 | |||||||||
| Legacy_information | [C.elegansII] NMK. Histone type H2B. HIS4 cluster. [EM] | ||||||||
| In_cluster | HIS4_cluster | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00109601 | ||||||||
| 00109602 | |||||||||
| 00109603 | |||||||||
| 00109604 | |||||||||
| Ortholog (194) | |||||||||
| Paralog (16) | |||||||||
| Structured_description | Concise_description | his-20 encodes an H2B histone; by homology, HIS-20 is predicted to function as a nucleosome component required for packaging of DNA into chromatin. | Paper_evidence | WBPaper00005142 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Predicted to be part of nucleosome. Is an ortholog of several human genes including H2BC3 (H2B clustered histone 3); H2BC5 (H2B clustered histone 5); and H2BC8 (H2B clustered histone 8). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K06C4.4 | |||||||
| Corresponding_transcript | K06C4.4.1 | ||||||||
| Other_sequence | Name_isotig06475 | ||||||||
| HO652559.1 | |||||||||
| JI466426.1 | |||||||||
| Associated_feature | WBsf234151 | ||||||||
| WBsf234152 | |||||||||
| WBsf234153 | |||||||||
| Experimental_info | RNAi_result (28) | ||||||||
| Expr_pattern | Expr1153757 | ||||||||
| Drives_construct | WBCnstr00036619 | ||||||||
| Construct_product | WBCnstr00036619 | ||||||||
| Expression_cluster (38) | |||||||||
| Interaction (200) | |||||||||
| Map_info | Map | V | Position | 1.67448 | |||||
| Positive | Positive_clone | K06C4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005142 | ||||||||
| WBPaper00005182 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
