Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00001907

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00001907SMapS_parentSequenceF17E9
IdentityVersion1
NameCGC_namehis-33Person_evidenceWBPerson160
Sequence_nameF17E9.13
Molecular_nameF17E9.13
F17E9.13.1
CE04501
Other_nameCELE_F17E9.13Accession_evidenceNDBBX284604
Public_namehis-33
DB_infoDatabaseAceViewgene4J100
WormQTLgeneWBGene00001907
WormFluxgeneWBGene00001907
NDBlocus_tagCELE_F17E9.13
NCBIgene191678
RefSeqproteinNM_069007.1
SwissProtUniProtAccP09588
UniProt_GCRPUniProtAccP09588
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:26WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhis
AlleleWBVar02154293
WBVar01500079
WBVar01498996
WBVar01499396
WBVar01499633
WBVar01500245
StrainWBStrain00034723
In_clusterHIS5_cluster
RNASeq_FPKM (74)
GO_annotation00109646
00109647
00109648
00109649
Ortholog (204)
Paralog (18)
Structured_descriptionConcise_descriptionhis-33 encodes an H2A histone; by homology, HIS-33 is predicted to function as a nucleosome component required for packaging of DNA into chromatin; his-33 is a replication-dependent histone locus that resides in the HIS5 cluster on chromosome IV.Paper_evidenceWBPaper00005142
Curator_confirmedWBPerson1843
WBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Predicted to be part of nucleosome. Human ortholog(s) of this gene implicated in oral mucosa leukoplakia and oral squamous cell carcinoma. Is an ortholog of human H2AX (H2A.X variant histone).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0050866Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:4739)
DOID:9655Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:4739)
Molecular_infoCorresponding_CDSF17E9.13
Corresponding_transcriptF17E9.13.1
Other_sequence (102)
Experimental_infoRNAi_result (27)
Expr_patternExpr1148862
Expr1200178
Expr2012450
Expr2030686
Drives_constructWBCnstr00036607
Construct_productWBCnstr00036607
Microarray_resultsSMD_F17E9.13
Aff_F35H10.1
Expression_cluster (45)
Interaction (227)
Map_infoMapIVPosition3.70883
PositivePositive_cloneF17E9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00005142
WBPaper00005182
WBPaper00038491
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene