WormBase Tree Display for Gene: WBGene00001909

WBGene00001909 SMap: S_parent: Sequence: C50F4
  Identity: Version: 1
    Name: CGC_name: his-35 Person_evidence: WBPerson160
      Sequence_name: C50F4.13
      Molecular_name: C50F4.13
        C50F4.13.1
        CE05477
      Other_name: CELE_C50F4.13 Accession_evidence: NDB BX284605
      Public_name: his-35
    DB_info: Database: AceView gene 5K22
        WormQTL gene WBGene00001909
        WormFlux gene WBGene00001909
        NDB locus_tag CELE_C50F4.13
        Panther gene CAEEL|WormBase=WBGene00001909|UniProtKB=Q27485
          family PTHR23430
        NCBI gene 179339
        RefSeq protein NM_073062.10
        TrEMBL UniProtAcc Q27485
        UniProt_GCRP UniProtAcc Q27485
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:26 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: his
    Allele (14)
    In_cluster: HIS6_cluster
    RNASeq_FPKM (74)
    GO_annotation (11)
    Contained_in_operon: CEOP5232
    Ortholog (221)
    Paralog (18)
    Structured_description: Concise_description: his-35 encodes an H2A histone. Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable DNA binding activity. Predicted to be located in chromosome and nucleus. Predicted to be part of nucleosome. Human ortholog(s) of this gene implicated in oral mucosa leukoplakia and oral squamous cell carcinoma. Is an ortholog of human H2AX (H2A.X variant histone). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0050866 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4739)
      DOID:9655 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4739)
  Molecular_info: Corresponding_CDS: C50F4.13
    Corresponding_transcript: C50F4.13.1
    Other_sequence (51)
    Associated_feature: WBsf652922
      WBsf669240
      WBsf669241
      WBsf981978
      WBsf234239
  Experimental_info: RNAi_result: WBRNAi00042939 Inferred_automatically: RNAi_primary
      WBRNAi00012233 Inferred_automatically: RNAi_primary
      WBRNAi00030041 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1024217
      Expr1031115
      Expr1146908
      Expr2012452
      Expr2030688
    Drives_construct: WBCnstr00036605
    Construct_product: WBCnstr00036605
    Microarray_results (20)
    Expression_cluster (179)
    Interaction (276)
  Map_info: Map: V Position: 2.04719 Error: 0.000387
    Positive: Positive_clone: C50F4 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4995
        4485
    Pseudo_map_position
  Reference: WBPaper00005142
    WBPaper00033775
    WBPaper00038491
    WBPaper00039712
    WBPaper00052016
    WBPaper00055090
    WBPaper00058078
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene