WormBase Tree Display for Gene: WBGene00002041
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| WBGene00002041 | SMap | S_parent | Sequence | Y66H1A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | hum-8 | |||||||
| Sequence_name | Y66H1A.6 | ||||||||
| Molecular_name | Y66H1A.6a | ||||||||
| Y66H1A.6a.1 | |||||||||
| CE48936 | |||||||||
| Y66H1A.6c | |||||||||
| CE48797 | |||||||||
| Y66H1A.6c.1 | |||||||||
| Other_name | CELE_Y66H1A.6 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | hum-8 | ||||||||
| DB_info | Database | AceView | gene | 4B182 | |||||
| WormQTL | gene | WBGene00002041 | |||||||
| WormFlux | gene | WBGene00002041 | |||||||
| NDB | locus_tag | CELE_Y66H1A.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00002041|UniProtKB=U4PBY2 | |||||||
| family | PTHR13140 | ||||||||
| NCBI | gene | 176872 | |||||||
| RefSeq | protein | NM_001307645.3 | |||||||
| NM_001028377.5 | |||||||||
| TrEMBL | UniProtAcc | H2L0I7 | |||||||
| U4PBY2 | |||||||||
| UniProt_GCRP | UniProtAcc | U4PBY2 | |||||||
| OMIM | gene | 600970 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hum | ||||||||
| Allele (177) | |||||||||
| Legacy_information | [Titus MA] hum: heavy chain of an unconventional myosin hum-8 encodees a class VI unconventional myosin that is closely related to HUM-3 | ||||||||
| Strain | WBStrain00032557 | ||||||||
| WBStrain00049468 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (22) | |||||||||
| Ortholog (40) | |||||||||
| Paralog (21) | |||||||||
| Structured_description | Automated_description | Predicted to enable actin filament binding activity and microfilament motor activity. Predicted to be involved in actin filament organization; endocytosis; and vesicle transport along actin filament. Predicted to be located in actin cytoskeleton and endocytic vesicle. Predicted to be part of myosin complex. Human ortholog(s) of this gene implicated in auditory system disease (multiple) and reproductive organ cancer (multiple). Is an ortholog of human MYO6 (myosin VI). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0110495 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7605) | ||||
| DOID:10283 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7605) | ||||||
| DOID:10003 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7605) | ||||||
| DOID:0110552 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7605) | ||||||
| DOID:2394 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7605) | ||||||
| Molecular_info | Corresponding_CDS | Y66H1A.6a | |||||||
| Y66H1A.6c | |||||||||
| Corresponding_CDS_history | Y66H1A.6:wp126 | ||||||||
| Y66H1A.6a:wp239 | |||||||||
| Y66H1A.6b:wp154 | |||||||||
| Y66H1A.6b:wp239 | |||||||||
| Y66H1A.6b:wp271 | |||||||||
| Corresponding_transcript | Y66H1A.6a.1 | ||||||||
| Y66H1A.6c.1 | |||||||||
| Other_sequence (11) | |||||||||
| Associated_feature | WBsf667719 | ||||||||
| WBsf667720 | |||||||||
| WBsf667721 | |||||||||
| WBsf667722 | |||||||||
| WBsf995143 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037719 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00080591 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021255 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057961 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024836 | ||||||||
| Expr1161388 | |||||||||
| Expr2012650 | |||||||||
| Expr2030886 | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (160) | |||||||||
| Interaction (38) | |||||||||
| Map_info | Map | IV | Position | -25.9969 | Error | 0.006592 | |||
| Positive | Positive_clone | Y66H1A | Person_evidence | WBPerson658 | |||||
| Inferred_automatically | From sequence, transcript, pseudogene data | ||||||||
| Mapping_data | Multi_point | 5489 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00023304 | ||||||||
| WBPaper00024200 | |||||||||
| WBPaper00025258 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064057 | |||||||||
| WBPaper00064860 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
