WormBase Tree Display for Gene: WBGene00002124
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| WBGene00002124 | SMap | S_parent | Sequence | F08G12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | inx-2 | Person_evidence | WBPerson247 | |||||
| Sequence_name | F08G12.10 | ||||||||
| Molecular_name | F08G12.10 | ||||||||
| F08G12.10.1 | |||||||||
| CE26709 | |||||||||
| Other_name | opu-2 | ||||||||
| XL914 | Accession_evidence | EMBL | AF304127 | ||||||
| CELE_F08G12.10 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | inx-2 | ||||||||
| DB_info | Database | AceView | gene | XL914 | |||||
| WormQTL | gene | WBGene00002124 | |||||||
| WormFlux | gene | WBGene00002124 | |||||||
| NDB | locus_tag | CELE_F08G12.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00002124|UniProtKB=Q9U3K5 | |||||||
| family | PTHR11893 | ||||||||
| NCBI | gene | 181318 | |||||||
| RefSeq | protein | NM_077484.6 | |||||||
| SwissProt | UniProtAcc | Q9U3K5 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U3K5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | inx | ||||||||
| Allele (25) | |||||||||
| Legacy_information | [Barnes TM] opu for OPUS protein. Predicted gene F08G12.2 | ||||||||
| Strain | WBStrain00035625 | ||||||||
| WBStrain00005329 | |||||||||
| WBStrain00050847 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Ortholog (31) | |||||||||
| Paralog (24) | |||||||||
| Structured_description | Automated_description | Predicted to enable gap junction hemi-channel activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in gap junction and plasma membrane. Expressed in AVK; intestine; pharyngeal-intestinal valve; and pharynx. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F08G12.10 | |||||||
| Corresponding_CDS_history | F08G12.10:wp40 | ||||||||
| Corresponding_transcript | F08G12.10.1 | ||||||||
| Other_sequence | AF304127 | ||||||||
| CR02351 | |||||||||
| CRC06823_1 | |||||||||
| CRC03217_1 | |||||||||
| PPC07001_1 | |||||||||
| BXC03473_1 | |||||||||
| Associated_feature | WBsf655705 | ||||||||
| WBsf671022 | |||||||||
| WBsf671023 | |||||||||
| WBsf671024 | |||||||||
| WBsf1006966 | |||||||||
| WBsf1023850 | |||||||||
| WBsf237951 | |||||||||
| WBsf237952 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00061779 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00098191 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012917 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033468 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044036 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1945 | ||||||||
| Expr8670 | |||||||||
| Expr1022293 | |||||||||
| Expr1031243 | |||||||||
| Expr1148002 | |||||||||
| Expr2012798 | |||||||||
| Expr2031037 | |||||||||
| Drives_construct | WBCnstr00010536 | ||||||||
| WBCnstr00013437 | |||||||||
| WBCnstr00016938 | |||||||||
| WBCnstr00036435 | |||||||||
| Construct_product | WBCnstr00036435 | ||||||||
| Antibody | WBAntibody00000518 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (253) | |||||||||
| Interaction | WBInteraction000539122 | ||||||||
| WBInteraction000559182 | |||||||||
| WBInteraction000580101 | |||||||||
| Map_info | Map | X | Position | 2.87044 | Error | 0.002308 | |||
| Positive | Positive_clone | F08G12 | Person_evidence | WBPerson43 | |||||
| Inferred_automatically | From sequence, transcript, pseudogene data | ||||||||
| Mapping_data | Multi_point | 4442 | |||||||
| 4945 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00002950 | ||||||||
| WBPaper00018354 | |||||||||
| WBPaper00023294 | |||||||||
| WBPaper00026596 | |||||||||
| WBPaper00028502 | |||||||||
| WBPaper00053133 | |||||||||
| WBPaper00056010 | |||||||||
| WBPaper00063537 | |||||||||
| Remark | jocelyn@biosci.cbs.umn.edu says that this gene is f08g12.10 not f08g12.2 | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
