WormBase Tree Display for Gene: WBGene00003130
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| WBGene00003130 | Evidence | Person_evidence | WBPerson805 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y116A8A | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | map-2 | Person_evidence | WBPerson732 | |||||
| Sequence_name | Y116A8A.9 | ||||||||
| Molecular_name | Y116A8A.9a | ||||||||
| Y116A8A.9a.1 | |||||||||
| CE24146 | |||||||||
| Y116A8A.9b | |||||||||
| CE47033 | |||||||||
| Y116A8A.9c | |||||||||
| CE46993 | |||||||||
| Y116A8A.9b.1 | |||||||||
| Y116A8A.9c.1 | |||||||||
| Other_name | CELE_Y116A8A.9 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | map-2 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:30 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | map | ||||||||
| Allele (225) | |||||||||
| Strain | WBStrain00001470 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (18) | |||||||||
| Contained_in_operon | CEOP4588 | ||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00012075 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00009960 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00000155 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00003129 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00019673 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00020088 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00021088 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00021555 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | map-2 encodes a methionine aminopeptidase; loss of map-2 activity via RNAi results in sterility due to germ line proliferation defects; when expressed in vitro, MAP-2 displays methionine aminopeptidase activity that is sensitive to the inhibitor fumagillin. | Paper_evidence | WBPaper00024478 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 06 Jul 2011 00:00:00 | ||||||||
| Automated_description | Enables exopeptidase activity. Acts upstream of or within with a positive effect on germ cell proliferation. Predicted to be located in cytoplasm. Is an ortholog of human METAP2 (methionyl aminopeptidase 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y116A8A.9a | |||||||
| Y116A8A.9b | |||||||||
| Y116A8A.9c | |||||||||
| Corresponding_transcript | Y116A8A.9a.1 | ||||||||
| Y116A8A.9b.1 | |||||||||
| Y116A8A.9c.1 | |||||||||
| Other_sequence (133) | |||||||||
| Associated_feature | WBsf668574 | ||||||||
| WBsf668575 | |||||||||
| WBsf998920 | |||||||||
| WBsf998921 | |||||||||
| WBsf998922 | |||||||||
| WBsf998923 | |||||||||
| WBsf998924 | |||||||||
| WBsf1018910 | |||||||||
| WBsf1018911 | |||||||||
| WBsf231283 | |||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern | Chronogram558 | ||||||||
| Expr6890 | |||||||||
| Expr1010920 | |||||||||
| Expr1031476 | |||||||||
| Expr1158935 | |||||||||
| Expr2013375 | |||||||||
| Expr2031607 | |||||||||
| Drives_construct | WBCnstr00002340 | ||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (115) | |||||||||
| Interaction (56) | |||||||||
| Map_info | Map | IV | Position | 15.3581 | Error | 0.00754 | |||
| Positive | Positive_clone | Y116A8A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024478 | ||||||||
| WBPaper00027281 | |||||||||
| WBPaper00033099 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
