WormBase Tree Display for Gene: WBGene00003349
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| WBGene00003349 | Evidence | Paper_evidence | WBPaper00005825 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F08F3 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | mir-255 | Person_evidence | WBPerson18 | |||||
| Sequence_name | F08F3.11 | ||||||||
| Molecular_name | F08F3.11 | ||||||||
| F08F3.11a | |||||||||
| F08F3.11b | |||||||||
| Other_name | cel-mir-255 | Remark | miRBase V21 import | ||||||
| MirGeneDB 2.1 import | |||||||||
| CELE_F08F3.11 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | mir-255 | ||||||||
| DB_info | Database | miRBase | acc | MI0000331 | |||||
| MirGeneDB | cel | Cel-Mir-255 | |||||||
| NDB | locus_tag | CELE_F08F3.11 | |||||||
| NCBI | gene | 3565881 | |||||||
| RefSeq | protein | NR_002395.1 | |||||||
| RNAcentral | URSid | URS0000180E1A | |||||||
| URS00001B6367 | |||||||||
| URS0000376656 | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:31 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001265 | |||||||
| Gene_class | mir | ||||||||
| Allele | WBVar01499528 | ||||||||
| WBVar01499740 | |||||||||
| WBVar01500129 | |||||||||
| WBVar01499496 | |||||||||
| WBVar01499316 | |||||||||
| WBVar01500066 | |||||||||
| Strain | WBStrain00026612 | ||||||||
| In_cluster | MIR-255 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Structured_description | Concise_description | mir-255 encodes a microRNA, a small non-protein coding RNA; as mir-255 could not be detected on northern blots, its expression profile is unknown; many of the known microRNAs are involved in post-transcriptional regulation of genes; the precise function of miR-255 is unknown. | Paper_evidence | WBPaper00005825 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 25 Feb 2005 00:00:00 | ||||||||
| Automated_description | Is affected by several genes including eat-2; alg-1; and alg-2 based on RNA-seq studies. Is affected by nicotine; multi-walled carbon nanotube; and paraquat based on quantitative PCR and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_transcript | F08F3.11 | |||||||
| F08F3.11a | |||||||||
| F08F3.11b | |||||||||
| Associated_feature | WBsf979131 | ||||||||
| WBsf1000002 | |||||||||
| Experimental_info | Expr_pattern | Expr2596 | |||||||
| Expr8433 | |||||||||
| Expr10963 | |||||||||
| Expr13551 | |||||||||
| Drives_construct | WBCnstr00005495 | ||||||||
| WBCnstr00016914 | |||||||||
| Expression_cluster (19) | |||||||||
| Interaction | WBInteraction000542162 | ||||||||
| Map_info | Map | V | Position | -1.93502 | |||||
| Positive | Positive_clone | F08F3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005825 | ||||||||
| WBPaper00032329 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
