WormBase Tree Display for Gene: WBGene00003384
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| WBGene00003384 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | moc-1 | Person_evidence | WBPerson435 | |||||
| Sequence_name | T06H11.4 | ||||||||
| Molecular_name | T06H11.4 | ||||||||
| T06H11.4.1 | |||||||||
| CE31596 | |||||||||
| Other_name | CELE_T06H11.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | moc-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:31 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | moc | ||||||||
| Allele (33) | |||||||||
| Strain | WBStrain00001525 | ||||||||
| WBStrain00001524 | |||||||||
| WBStrain00031420 | |||||||||
| In_cluster | conserved_RDE-1_cluster | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (26) | |||||||||
| Ortholog (32) | |||||||||
| Paralog | WBGene00003031 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00003385 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | moc-1 encodes an ortholog of human GEPHYRIN (GPHN; OMIM:603930), which when mutated leads to molybdenum cofactor (MoCo) deficiency; MOC-1 is also paralogous to LIN-46. | Paper_evidence | WBPaper00018999 | |||||
| Curator_confirmed | WBPerson48 | ||||||||
| WBPerson1823 | |||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable molybdopterin molybdotransferase activity. Predicted to be involved in Mo-molybdopterin cofactor biosynthetic process; postsynaptic neurotransmitter receptor diffusion trapping; and synapse organization. Predicted to be located in cytosol; dendrite; and postsynapse. Expressed in tail. Human ortholog(s) of this gene implicated in molybdenum cofactor deficiency type C. Is an ortholog of human GPHN (gephyrin). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111166 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15465) | ||||
| DOID:655 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15465) | ||||||
| Molecular_info | Corresponding_CDS | T06H11.4 | |||||||
| Corresponding_CDS_history | T06H11.4:wp83 | ||||||||
| Corresponding_transcript | T06H11.4.1 | ||||||||
| Other_sequence | Dviv_isotig23193 | ||||||||
| CR07420 | |||||||||
| CRC07681_1 | |||||||||
| Associated_feature | WBsf654305 | ||||||||
| WBsf1006624 | |||||||||
| WBsf1006625 | |||||||||
| WBsf237835 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00033458 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00052692 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018323 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr6625 | ||||||||
| Expr6626 | |||||||||
| Expr1020014 | |||||||||
| Expr1031558 | |||||||||
| Expr1156297 | |||||||||
| Expr2013641 | |||||||||
| Expr2031875 | |||||||||
| Drives_construct | WBCnstr00002325 | ||||||||
| WBCnstr00036148 | |||||||||
| WBCnstr00040863 | |||||||||
| Construct_product | WBCnstr00016474 | ||||||||
| WBCnstr00036148 | |||||||||
| WBCnstr00040863 | |||||||||
| WBCnstr00040864 | |||||||||
| WBCnstr00040865 | |||||||||
| WBCnstr00040866 | |||||||||
| WBCnstr00040867 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (94) | |||||||||
| Interaction (43) | |||||||||
| Map_info | Map | X | Position | 1.80708 | Error | 0.023848 | |||
| Positive | Positive_clone | T06H11 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4494 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00018999 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056452 | |||||||||
| Remark | Sequence connection from [Moss E] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
