WormBase Tree Display for Gene: WBGene00003528
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| WBGene00003528 | Evidence | Author_evidence | Moehrlen F | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C37H5 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | nas-9 | Person_evidence | WBPerson1103 | |||||
| Sequence_name | C37H5.9 | ||||||||
| Molecular_name | C37H5.9a | ||||||||
| C37H5.9a.1 | |||||||||
| CE08632 | |||||||||
| C37H5.9b | |||||||||
| CE29710 | |||||||||
| C37H5.9c | |||||||||
| CE32825 | |||||||||
| C37H5.9b.1 | |||||||||
| C37H5.9c.1 | |||||||||
| C37H5.9c.2 | |||||||||
| Other_name | CELE_C37H5.9 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nas-9 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nas | ||||||||
| Allele (78) | |||||||||
| Strain | WBStrain00037211 | ||||||||
| WBStrain00002581 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (33) | |||||||||
| Paralog (48) | |||||||||
| Structured_description | Concise_description | nas-9 encodes an astacin-like metalloprotease; loss of nas-9 activity via RNAi results in low levels (6%) of embryonic lethality; a nas-9::GFP promoter fusion is expressed in embryos and in the hypodermis of larvae and adults. | Paper_evidence | WBPaper00004651 | |||||
| WBPaper00006254 | |||||||||
| WBPaper00006525 | |||||||||
| WBPaper00031006 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 15 Feb 2008 00:00:00 | ||||||||
| Automated_description | Predicted to enable metalloendopeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in extracellular region. Expressed in hyp7 syncytium; spermatheca; and uterus. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C37H5.9a | |||||||
| C37H5.9b | |||||||||
| C37H5.9c | |||||||||
| Corresponding_transcript | C37H5.9a.1 | ||||||||
| C37H5.9b.1 | |||||||||
| C37H5.9c.1 | |||||||||
| C37H5.9c.2 | |||||||||
| Other_sequence | GPC02418_1 | ||||||||
| ACC10859_1 | |||||||||
| Tcir_isotig14873 | |||||||||
| CBC01983_1 | |||||||||
| GP03159 | |||||||||
| FC544775.1 | |||||||||
| Associated_feature | WBsf1019560 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00061409 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00001290 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042130 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011736 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00089007 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029648 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr5468 | ||||||||
| Expr8911 | |||||||||
| Expr1012718 | |||||||||
| Expr1146131 | |||||||||
| Expr2013892 | |||||||||
| Expr2032132 | |||||||||
| Drives_construct | WBCnstr00003140 | ||||||||
| WBCnstr00013605 | |||||||||
| WBCnstr00036068 | |||||||||
| Construct_product | WBCnstr00013605 | ||||||||
| WBCnstr00036068 | |||||||||
| Microarray_results (28) | |||||||||
| Expression_cluster (255) | |||||||||
| Interaction | WBInteraction000423543 | ||||||||
| WBInteraction000567804 | |||||||||
| Map_info | Map | V | Position | -4.1466 | Error | 0.009813 | |||
| Positive | Positive_clone | C37H5 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00006254 | ||||||||
| WBPaper00024242 | |||||||||
| WBPaper00028789 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
