WormBase Tree Display for Gene: WBGene00003586
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| WBGene00003586 | SMap | S_parent | Sequence | F13H10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | ndx-9 | Person_evidence | WBPerson3090 | |||||
| Sequence_name | F13H10.2 | ||||||||
| Molecular_name | F13H10.2a | ||||||||
| F13H10.2a.1 | |||||||||
| CE35474 | |||||||||
| F13H10.2b | |||||||||
| CE27958 | |||||||||
| F13H10.2b.1 | |||||||||
| Other_name | CELE_F13H10.2 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | ndx-9 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ndx | ||||||||
| Allele (24) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Contained_in_operon | CEOP4400 | ||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00003578 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Concise_description | The ndx-9 gene encodes a member of the NADH pyrophosphatase subfamily of the NUDIX hydrolases. | Paper_evidence | WBPaper00004210 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable NADH pyrophosphatase activity. Predicted to be involved in NAD catabolic process; NADH metabolic process; and NADP catabolic process. Predicted to be located in peroxisome. Is an ortholog of human NUDT13 (nudix hydrolase 13). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F13H10.2a | |||||||
| F13H10.2b | |||||||||
| Corresponding_CDS_history | F13H10.2:wp52 | ||||||||
| F13H10.2:wp109 | |||||||||
| Corresponding_transcript | F13H10.2a.1 | ||||||||
| F13H10.2b.1 | |||||||||
| Other_sequence | CJC04357_1 | ||||||||
| Hbac_isotig06207 | |||||||||
| CBC11969_1 | |||||||||
| CBC02711_1 | |||||||||
| JI171139.1 | |||||||||
| JI174954.1 | |||||||||
| FK801497.1 | |||||||||
| Dviv_isotig17608 | |||||||||
| Associated_feature | WBsf230804 | ||||||||
| WBsf230805 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00044545 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00033616 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013240 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076300 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020216 | ||||||||
| Expr1031636 | |||||||||
| Expr1148499 | |||||||||
| Expr2013949 | |||||||||
| Expr2032188 | |||||||||
| Drives_construct | WBCnstr00036024 | ||||||||
| Construct_product | WBCnstr00036024 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (82) | |||||||||
| Interaction (16) | |||||||||
| Map_info | Map | IV | Position | 4.78004 | Error | 0.000665 | |||
| Positive | Positive_clone | F13H10 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00004210 | ||||||||
| WBPaper00005401 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
