WormBase Tree Display for Gene: WBGene00003644
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| WBGene00003644 | Evidence | Paper_evidence | WBPaper00003416 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F36D3 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | nhr-54 | Person_evidence | WBPerson600 | |||||
| Sequence_name | F36D3.2 | ||||||||
| Molecular_name | F36D3.2 | ||||||||
| F36D3.2.1 | |||||||||
| CE15966 | |||||||||
| Other_name | CELE_F36D3.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-54 | ||||||||
| DB_info | Database | AceView | gene | 5Q984 | |||||
| WormQTL | gene | WBGene00003644 | |||||||
| WormFlux | gene | WBGene00003644 | |||||||
| NDB | locus_tag | CELE_F36D3.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003644|UniProtKB=O45460 | |||||||
| family | PTHR45680 | ||||||||
| NCBI | gene | 180106 | |||||||
| RefSeq | protein | NM_074778.6 | |||||||
| SwissProt | UniProtAcc | O45460 | |||||||
| UniProt_GCRP | UniProtAcc | O45460 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (94) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00034532 | ||||||||
| 00034533 | |||||||||
| 00034534 | |||||||||
| 00034535 | |||||||||
| 00111382 | |||||||||
| 00111383 | |||||||||
| 00111384 | |||||||||
| 00111385 | |||||||||
| Ortholog (24) | |||||||||
| Paralog (217) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Expressed in head neurons; intestine; pharynx; and tail neurons. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F36D3.2 | |||||||
| Corresponding_transcript | F36D3.2.1 | ||||||||
| Associated_feature | WBsf978543 | ||||||||
| WBsf1002461 | |||||||||
| WBsf1021137 | |||||||||
| WBsf235139 | |||||||||
| Transcription_factor | WBTranscriptionFactor000494 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00107147 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014401 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031846 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046471 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr7542 | ||||||||
| Expr1023408 | |||||||||
| Expr1150349 | |||||||||
| Expr2014204 | |||||||||
| Expr2032445 | |||||||||
| Drives_construct | WBCnstr00012687 | ||||||||
| WBCnstr00035976 | |||||||||
| Construct_product | WBCnstr00035976 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (101) | |||||||||
| Interaction | WBInteraction000535068 | ||||||||
| WBInteraction000573482 | |||||||||
| Map_info | Map | V | Position | 10.1871 | Error | 0.007594 | |||
| Positive | Positive_clone | F36D3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4776 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| WBPaper00033099 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
