WormBase Tree Display for Gene: WBGene00003677
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| WBGene00003677 | SMap | S_parent | Sequence | Y41D4B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | nhr-87 | Person_evidence | WBPerson600 | |||||
| Sequence_name | Y41D4B.7 | ||||||||
| Molecular_name | Y41D4B.7 | ||||||||
| Y41D4B.7.1 | |||||||||
| CE30005 | |||||||||
| Other_name | CELE_Y41D4B.7 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | nhr-87 | ||||||||
| DB_info | Database | AceView | gene | 4C389 | |||||
| WormQTL | gene | WBGene00003677 | |||||||
| WormFlux | gene | WBGene00003677 | |||||||
| NDB | locus_tag | CELE_Y41D4B.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003677|UniProtKB=Q8WSN9 | |||||||
| family | PTHR46011 | ||||||||
| NCBI | gene | 176972 | |||||||
| RefSeq | protein | NM_001392257.1 | |||||||
| TREEFAM | TREEFAM_ID | TF315401 | |||||||
| TrEMBL | UniProtAcc | Q8WSN9 | |||||||
| UniProt_GCRP | UniProtAcc | Q8WSN9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (63) | |||||||||
| Strain | WBStrain00037040 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (21) | |||||||||
| Paralog (218) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y41D4B.7 | |||||||
| Corresponding_transcript | Y41D4B.7.1 | ||||||||
| Associated_feature | WBsf645808 | ||||||||
| WBsf978921 | |||||||||
| WBsf995495 | |||||||||
| WBsf995496 | |||||||||
| Transcription_factor | WBTranscriptionFactor000718 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00020496 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00001038 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056399 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014938 | ||||||||
| Expr1031708 | |||||||||
| Expr1159881 | |||||||||
| Expr2014238 | |||||||||
| Expr2032479 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (72) | |||||||||
| Map_info | Map | IV | Position | -16.3188 | Error | 0.015025 | |||
| Positive | Positive_clone | Y41D4 | |||||||
| Y41D4B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
