WormBase Tree Display for Gene: WBGene00003712
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| WBGene00003712 | SMap | S_parent | Sequence | Y41D4B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | nhr-122 | Person_evidence | WBPerson600 | |||||
| Sequence_name | Y41D4B.9 | ||||||||
| Molecular_name | Y41D4B.9 | ||||||||
| Y41D4B.9.1 | |||||||||
| CE26096 | |||||||||
| Other_name | CELE_Y41D4B.9 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | nhr-122 | ||||||||
| DB_info | Database | AceView | gene | 4C379 | |||||
| WormQTL | gene | WBGene00003712 | |||||||
| WormFlux | gene | WBGene00003712 | |||||||
| NDB | locus_tag | CELE_Y41D4B.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003712|UniProtKB=Q95Y09 | |||||||
| family | PTHR46011 | ||||||||
| NCBI | gene | 189821 | |||||||
| RefSeq | protein | NM_067708.5 | |||||||
| TREEFAM | TREEFAM_ID | TF315401 | |||||||
| TrEMBL | UniProtAcc | Q95Y09 | |||||||
| UniProt_GCRP | UniProtAcc | Q95Y09 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (87) | |||||||||
| Strain | WBStrain00036434 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (20) | |||||||||
| Paralog (218) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y41D4B.9 | |||||||
| Corresponding_transcript | Y41D4B.9.1 | ||||||||
| Associated_feature | WBsf645805 | ||||||||
| WBsf978874 | |||||||||
| WBsf227963 | |||||||||
| Transcription_factor | WBTranscriptionFactor000698 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00056401 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00107093 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015584 | ||||||||
| Expr1031728 | |||||||||
| Expr1159883 | |||||||||
| Expr2014021 | |||||||||
| Expr2032261 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (81) | |||||||||
| Interaction | WBInteraction000535014 | ||||||||
| Map_info | Map | IV | Position | -16.4494 | Error | 0.023651 | |||
| Positive | Positive_clone | Y41D4B | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
