WormBase Tree Display for Gene: WBGene00003794
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| WBGene00003794 | SMap | S_parent | Sequence | Y41D4B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | npp-8 | Person_evidence | WBPerson1780 | |||||
| Sequence_name | Y41D4B.19 | ||||||||
| Molecular_name | Y41D4B.19a | ||||||||
| Y41D4B.19a.1 | |||||||||
| CE27625 | |||||||||
| Y41D4B.19b | |||||||||
| CE52059 | |||||||||
| Y41D4B.19c | |||||||||
| CE48212 | |||||||||
| Y41D4B.19b.1 | |||||||||
| Y41D4B.19c.1 | |||||||||
| Other_name | Nup155 | Paper_evidence | WBPaper00026834 | ||||||
| Y41D4A_3457.d | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y41D4B.19 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | npp-8 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 15 Mar 2007 08:57:59 | WBPerson2970 | Name_change | CGC_name | Nup155 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | npp | ||||||||
| Allele (849) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Contained_in_operon | CEOP4631 | ||||||||
| CEOP4615 | |||||||||
| Ortholog (36) | |||||||||
| Structured_description | Automated_description | Predicted to be a structural constituent of nuclear pore. Involved in embryo development; nucleus organization; and regulation of exit from mitosis. Part of nuclear pore. Human ortholog(s) of this gene implicated in familial atrial fibrillation. Is an ortholog of human NUP155 (nucleoporin 155). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0050650 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8063) | ||||
| Molecular_info | Corresponding_CDS | Y41D4B.19a | |||||||
| Y41D4B.19b | |||||||||
| Y41D4B.19c | |||||||||
| Corresponding_CDS_history | Y41D4B.19b:wp82 | ||||||||
| Y41D4B.19b:wp98 | |||||||||
| Y41D4B.19b:wp237 | |||||||||
| Y41D4B.19b:wp261 | |||||||||
| Corresponding_transcript | Y41D4B.19a.1 | ||||||||
| Y41D4B.19b.1 | |||||||||
| Y41D4B.19c.1 | |||||||||
| Other_sequence (17) | |||||||||
| Associated_feature (19) | |||||||||
| Experimental_info | RNAi_result (22) | ||||||||
| Expr_pattern | Expr9019 | ||||||||
| Expr1016681 | |||||||||
| Expr1031780 | |||||||||
| Expr1159872 | |||||||||
| Expr2014393 | |||||||||
| Expr2032634 | |||||||||
| Construct_product | WBCnstr00001839 | ||||||||
| WBCnstr00013676 | |||||||||
| Antibody | WBAntibody00001889 | ||||||||
| Microarray_results (47) | |||||||||
| Expression_cluster (165) | |||||||||
| Interaction (89) | |||||||||
| Map_info | Map | IV | Position | -17.1786 | Error | 0.263211 | |||
| Positive | Positive_clone | Y41D4B | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00006202 | ||||||||
| WBPaper00026834 | |||||||||
| WBPaper00028457 | |||||||||
| WBPaper00032497 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00048493 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| WBPaper00063941 | |||||||||
| WBPaper00064947 | |||||||||
| Remark | Sequence connection from [Askjaer P, Mattaj IW]. krb 13/11/01 | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
