WormBase Tree Display for Gene: WBGene00003818
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WBGene00003818 | SMap | S_parent | Sequence | CHROMOSOME_I | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | nsf | ||||||
Allele (57) | |||||||
Strain | WBStrain00005426 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (25) | |||||||
Ortholog (50) | |||||||
Structured_description | Automated_description | Predicted to enable ATP hydrolysis activity. Involved in IRE1-mediated unfolded protein response. Predicted to be located in Golgi stack. Expressed in several structures, including egg-laying apparatus; excretory gland cell; intestinal cell; pharynx; and rectal gland cell. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 96. Is an ortholog of human NSF (N-ethylmaleimide sensitive factor, vesicle fusing ATPase). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0070377 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8016) | ||
Molecular_info | Corresponding_CDS | H15N14.2a | |||||
H15N14.2b | |||||||
Corresponding_transcript | H15N14.2a.1 | ||||||
H15N14.2b.1 | |||||||
Other_sequence (41) | |||||||
Associated_feature (11) | |||||||
Experimental_info | RNAi_result (28) | ||||||
Expr_pattern | Expr7983 | ||||||
Expr15228 | |||||||
Expr15391 | |||||||
Expr1027092 | |||||||
Expr1031797 | |||||||
Expr1153147 | |||||||
Expr2014447 | |||||||
Expr2032688 | |||||||
Drives_construct | WBCnstr00013044 | ||||||
WBCnstr00035852 | |||||||
Construct_product | WBCnstr00013044 | ||||||
WBCnstr00021855 | |||||||
WBCnstr00035852 | |||||||
Microarray_results (26) | |||||||
Expression_cluster (131) | |||||||
Interaction (197) | |||||||
Map_info | Map | I | Position | 2.33751 | Error | 0.007821 | |
Positive | Positive_clone | H15N14 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Mapping_data | Multi_point | 5665 | |||||
4145 | |||||||
Pseudo_map_position | |||||||
Reference (15) | |||||||
Remark | Sequence connection from [Newman AP], [krb 020711] | ||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |